RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 CLIP2Q9UDT6 1046 aa27.66■■■□□ 2.02
EPCAM-201ENST00000263735 UTRNP46939 3433 aa27.65■■■□□ 2.02
EPCAM-201ENST00000263735 C9orf131Q5VYM1 1079 aa27.65■■■□□ 2.02
EPCAM-201ENST00000263735 NYAP2Q9P242 653 aa27.65■■■□□ 2.02
EPCAM-201ENST00000263735 PARP1P09874 1014 aaKnown RBP27.64■■■□□ 2.02
EPCAM-201ENST00000263735 GUCY1A2P33402 732 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 MAP3K10Q02779 954 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 DNM1Q05193 864 aaKnown RBP27.64■■■□□ 2.02
EPCAM-201ENST00000263735 KRT40Q6A162 431 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 CLEC10AQ8IUN9 316 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 CABP5Q9NP86 173 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 DOCK1Q14185 1865 aa27.64■■■□□ 2.02
EPCAM-201ENST00000263735 UBE2Q2LH0YL09 131 aa27.64■■■□□ 2.01
EPCAM-201ENST00000263735 KRT85P78386 507 aa27.64■■■□□ 2.01
EPCAM-201ENST00000263735 LRRC47Q8N1G4 583 aaKnown RBP27.64■■■□□ 2.01
EPCAM-201ENST00000263735 STAG2Q8N3U4 1231 aa27.64■■■□□ 2.01
EPCAM-201ENST00000263735 TMEM87AQ8NBN3 555 aa27.64■■■□□ 2.01
EPCAM-201ENST00000263735 LMBRD1Q9NUN5 540 aa27.64■■■□□ 2.01
EPCAM-201ENST00000263735 GDF11O95390 407 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 OTUD7BQ6GQQ9 843 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 APOBEC3FQ8IUX4 373 aaKnown RBP27.63■■■□□ 2.01
EPCAM-201ENST00000263735 CDAN1Q8IWY9 1227 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 MKL1Q969V6 931 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 GJB4Q9NTQ9 266 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 CNPY2Q9Y2B0 182 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 SCN4AP35499 1836 aa27.63■■■□□ 2.01
EPCAM-201ENST00000263735 SNHG28P0DPA3 235 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 PDHBP11177 359 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 XBP1P17861 261 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 ICA1Q05084 483 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 PKN1Q16512 942 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 TEPSINQ96N21 525 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 MTMR7Q9Y216 660 aa27.62■■■□□ 2.01
EPCAM-201ENST00000263735 V9GY48 417 aaPredicted RBP27.62■■■□□ 2.01
EPCAM-201ENST00000263735 DDNO94850 711 aaPredicted RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 SMARCA1P28370 1054 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 SEPT2Q15019 361 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 GPR162Q16538 588 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 CSPP1Q1MSJ5 1256 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 SKOR2Q2VWA4 1001 aaPredicted RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 ASPRV1Q53RT3 343 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 BRAPQ7Z569 592 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 TRPM4Q8TD43 1214 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 SPZ1Q9BXG8 430 aa27.61■■■□□ 2.01
EPCAM-201ENST00000263735 ASTN2O75129 1339 aaPredicted RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 ZC3H4Q9UPT8 1303 aaKnown RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 NCLP19338 710 aaKnown RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 LMOD1P29536 600 aaPredicted RBP27.61■■■□□ 2.01
EPCAM-201ENST00000263735 KLRF2D3W0D1 207 aa27.6■■■□□ 2.01
EPCAM-201ENST00000263735 PRPF40AO75400 957 aaKnown RBP27.6■■■□□ 2.01
EPCAM-201ENST00000263735 GH2P01242 217 aa27.6■■■□□ 2.01
EPCAM-201ENST00000263735 EEF2P13639 858 aaKnown RBP27.6■■■□□ 2.01
EPCAM-201ENST00000263735 EPS15P42566 896 aa27.6■■■□□ 2.01
EPCAM-201ENST00000263735 KIF23Q02241 960 aaPredicted RBP27.6■■■□□ 2.01
EPCAM-201ENST00000263735 RRP1BQ14684 758 aaKnown RBP27.6■■■□□ 2.01
EPCAM-201ENST00000263735 SHROOM1Q2M3G4 852 aaPredicted RBP27.6■■■□□ 2.01
EPCAM-201ENST00000263735 FAM173BQ6P4H8 233 aa27.6■■■□□ 2.01
EPCAM-201ENST00000263735 TRAK2O60296 914 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 GRIN3BO60391 1043 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 MMP1P03956 469 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 ATP2B2Q01814 1243 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 ATL3Q6DD88 541 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 USP17L2Q6R6M4 530 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 DEFB129Q9H1M3 183 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 SYNPO2Q9UMS6 1093 aa27.59■■■□□ 2.01
EPCAM-201ENST00000263735 USP17L5A8MUK1 530 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 SCG2P13521 617 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 PFKFB3Q16875 520 aaPredicted RBP27.58■■■□□ 2.01
EPCAM-201ENST00000263735 ANGEL2Q5VTE6 544 aaKnown RBP27.58■■■□□ 2.01
EPCAM-201ENST00000263735 RASGRP2Q7LDG7 609 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 FIBPO43427 364 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 MIGA2Q7L4E1 593 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 SCAND2PQ9GZW5 306 aaPredicted RBP27.58■■■□□ 2.01
EPCAM-201ENST00000263735 GDPD2Q9HCC8 539 aa27.58■■■□□ 2.01
EPCAM-201ENST00000263735 ADARB2Q9NS39 739 aaKnown RBP27.58■■■□□ 2.01
EPCAM-201ENST00000263735 GOLGA8HP0CJ92 632 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 JAG1P78504 1218 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 SAFBQ15424 915 aaKnown RBP eCLIP27.57■■■□□ 2
EPCAM-201ENST00000263735 GPATCH4Q5T3I0 446 aaKnown RBP27.57■■■□□ 2
EPCAM-201ENST00000263735 DPY19L2Q6NUT2 758 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 USP48Q86UV5 1035 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 CFAP45Q9UL16 551 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 ZBTB21Q9ULJ3 1066 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 SCAF8Q9UPN6 1271 aaKnown RBP27.57■■■□□ 2
EPCAM-201ENST00000263735 PITPNM2Q9BZ72 1349 aa27.57■■■□□ 2
EPCAM-201ENST00000263735 CYTH3O43739 400 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 CAP2P40123 477 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 SIAH1Q8IUQ4 282 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 HOOK2Q96ED9 719 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 ZNF396Q96N95 335 aaPredicted RBP27.56■■■□□ 2
EPCAM-201ENST00000263735 GGA3Q9NZ52 723 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 PPP2R3BQ9Y5P8 575 aa27.56■■■□□ 2
EPCAM-201ENST00000263735 hCG_1642624A0A1W2PR95 340 aa27.55■■■□□ 2
EPCAM-201ENST00000263735 KIF28PB7ZC32 967 aa27.55■■■□□ 2
EPCAM-201ENST00000263735 U2AF2P26368 475 aaKnown RBP eCLIP27.55■■■□□ 2
EPCAM-201ENST00000263735 ZNF543Q08ER8 600 aa27.55■■■□□ 2
EPCAM-201ENST00000263735 GNL2Q13823 731 aaKnown RBP27.55■■■□□ 2
EPCAM-201ENST00000263735 ELP1O95163 1332 aa27.55■■■□□ 2
EPCAM-201ENST00000263735 HIRAP54198 1017 aaPredicted RBP27.55■■■□□ 2
EPCAM-201ENST00000263735 GMCL1P1Q8NEA9 526 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms