RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
COL8A1-201ENST00000261037 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 CHL1O00533 1208 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 APBA3O96018 575 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 GYG1P46976 350 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 LRRC47Q8N1G4 583 aaKnown RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 U2AF1L4Q8WU68 220 aaKnown RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 EPSTI1Q96J88 318 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 DNM2P50570 870 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 GPKOWQ92917 476 aaPredicted RBP eCLIP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 CDCA7Q9BWT1 371 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 DKC1O60832 514 aaKnown RBP eCLIP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 TBC1D8O95759 1140 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 MAN1A1P33908 653 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 EIF4A1P60842 406 aaKnown RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 ATP11AP98196 1134 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 GPBP1Q86WP2 473 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 TBC1D31Q96DN5 1066 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 IRX3P78415 501 aaPredicted RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 HHATQ5VTY9 493 aa13.4□□□□□ -0.26
COL8A1-201ENST00000261037 REXO1Q8N1G1 1221 aaKnown RBP13.4□□□□□ -0.26
COL8A1-201ENST00000261037 BCRP11274 1271 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 ARHGEF16Q5VV41 709 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 MED10Q9BTT4 135 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 VPS37BQ9H9H4 285 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 ABCB4P21439 1286 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 PTH1RQ03431 593 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 PEX26Q7Z412 305 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 GLT8D2Q9H1C3 349 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 M0QZ92 97 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 GAS7O60861 476 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 BCAMP50895 628 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 LONRF2Q1L5Z9 754 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 PRR16Q569H4 304 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 KSR1Q8IVT5 923 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 RNF169Q8NCN4 708 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 KDM2BQ8NHM5 1336 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 COBLO75128 1261 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 NEDD9Q14511 834 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 GLG1Q92896 1179 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
COL8A1-201ENST00000261037 MKRN1Q9UHC7 482 aaKnown RBP13.39□□□□□ -0.27
COL8A1-201ENST00000261037 USP21Q9UK80 565 aa13.39□□□□□ -0.27
COL8A1-201ENST00000261037 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 NDUFAB1O14561 156 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 MFSD14BQ5SR56 506 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 CCDC89Q8N998 374 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 PPFIBP2Q8ND30 876 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 LZTS2Q9BRK4 669 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 ST7Q9NRC1 585 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 FAM184BQ9ULE4 1060 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 IFRD2Q12894 506 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 RPS6KA1Q15418 735 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 C2CD5Q86YS7 1000 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 ARHGEF2Q92974 986 aaKnown RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 SWAP70Q9UH65 585 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 USP17L12C9JPN9 530 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 USP17L21D6R901 530 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 TMTC1Q8IUR5 882 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 CARD10Q9BWT7 1032 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 ARPP21Q9UBL0 812 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 GUCY2FP51841 1108 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 GOLGA6BA6NDN3 693 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 BUB1O43683 1085 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 ALAS1P13196 640 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 PFKFB1P16118 471 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 TAB3Q8N5C8 712 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 XPO4Q9C0E2 1151 aaKnown RBP13.38□□□□□ -0.27
COL8A1-201ENST00000261037 TRPC6Q9Y210 931 aa13.38□□□□□ -0.27
COL8A1-201ENST00000261037 TMCO4Q5TGY1 634 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 ANKRD42Q8N9B4 389 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 DEPTORQ8TB45 409 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 DSCC1Q9BVC3 393 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 IFIH1Q9BYX4 1025 aaKnown RBP13.37□□□□□ -0.27
COL8A1-201ENST00000261037 AFG3L2Q9Y4W6 797 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 KRT15P19012 456 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 FAM47CQ5HY64 1035 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
COL8A1-201ENST00000261037 THRAP3Q9Y2W1 955 aaKnown RBP13.37□□□□□ -0.27
COL8A1-201ENST00000261037 KCNJ18B7U540 433 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 FLOT1O75955 427 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 KCNJ12Q14500 433 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 SCYL2Q6P3W7 929 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 NLRX1Q86UT6 975 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 HOXB7P09629 217 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 TTLL7Q6ZT98 887 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 SYCE1Q8N0S2 351 aa13.37□□□□□ -0.27
COL8A1-201ENST00000261037 RSRC1Q96IZ7 334 aaKnown RBP13.37□□□□□ -0.27
COL8A1-201ENST00000261037 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms