RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 FSIP1Q8NA03 581 aa31.92■■■□□ 2.7
CCM2-201ENST00000258781 GOLPH3LQ9H4A5 285 aa31.92■■■□□ 2.7
CCM2-201ENST00000258781 V9GY48 417 aaPredicted RBP31.92■■■□□ 2.7
CCM2-201ENST00000258781 PICALMQ13492 652 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 SRBD1Q8N5C6 995 aaKnown RBP31.91■■■□□ 2.7
CCM2-201ENST00000258781 RNF214Q8ND24 703 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 AGBL3Q8NEM8 1001 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 TAOK2Q9UL54 1235 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 BTBD18B2RXH4 712 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 CAMK4Q16566 473 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 UVSSAQ2YD98 709 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 ENGASEQ8NFI3 743 aa31.91■■■□□ 2.7
CCM2-201ENST00000258781 CTAGE5O15320 804 aa31.9■■■□□ 2.7
CCM2-201ENST00000258781 PPP6R2O75170 966 aa31.9■■■□□ 2.7
CCM2-201ENST00000258781 NFIAQ12857 509 aa31.9■■■□□ 2.7
CCM2-201ENST00000258781 GRM4Q14833 912 aa31.9■■■□□ 2.7
CCM2-201ENST00000258781 JMYQ8N9B5 988 aa31.9■■■□□ 2.7
CCM2-201ENST00000258781 PLIN4Q96Q06 1357 aa31.89■■■□□ 2.7
CCM2-201ENST00000258781 GNAQP50148 359 aa31.89■■■□□ 2.7
CCM2-201ENST00000258781 SNW1Q13573 536 aaKnown RBP31.89■■■□□ 2.7
CCM2-201ENST00000258781 PRMT6Q96LA8 375 aaPredicted RBP31.89■■■□□ 2.7
CCM2-201ENST00000258781 PHF20Q9BVI0 1012 aa31.89■■■□□ 2.7
CCM2-201ENST00000258781 CACNB3P54284 484 aa31.89■■■□□ 2.69
CCM2-201ENST00000258781 PTPAQ15257 358 aa31.89■■■□□ 2.69
CCM2-201ENST00000258781 ZNF541Q9H0D2 1346 aa31.88■■■□□ 2.69
CCM2-201ENST00000258781 LMNB1P20700 586 aa31.88■■■□□ 2.69
CCM2-201ENST00000258781 GABPAQ06546 454 aa31.88■■■□□ 2.69
CCM2-201ENST00000258781 TNIP1Q15025 636 aa31.88■■■□□ 2.69
CCM2-201ENST00000258781 SHTN1A0MZ66 631 aa31.87■■■□□ 2.69
CCM2-201ENST00000258781 RILPL1Q5EBL4 403 aa31.87■■■□□ 2.69
CCM2-201ENST00000258781 OGFOD1Q8N543 542 aa31.87■■■□□ 2.69
CCM2-201ENST00000258781 KINO60870 393 aaKnown RBP31.86■■■□□ 2.69
CCM2-201ENST00000258781 SHISA4Q96DD7 197 aa31.86■■■□□ 2.69
CCM2-201ENST00000258781 TMEM47Q9BQJ4 181 aa31.86■■■□□ 2.69
CCM2-201ENST00000258781 VPS54Q9P1Q0 977 aa31.86■■■□□ 2.69
CCM2-201ENST00000258781 HDAC9Q9UKV0 1011 aa31.86■■■□□ 2.69
CCM2-201ENST00000258781 NOVP48745 357 aa31.86■■■□□ 2.69
CCM2-201ENST00000258781 AXDND1Q5T1B0 1012 aaPredicted RBP31.86■■■□□ 2.69
CCM2-201ENST00000258781 OSBPL5Q9H0X9 879 aaPredicted RBP31.86■■■□□ 2.69
CCM2-201ENST00000258781 TDRD3Q9H7E2 651 aaKnown RBP31.86■■■□□ 2.69
CCM2-201ENST00000258781 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.86■■■□□ 2.69
CCM2-201ENST00000258781 SPDYE2BA6NHP3 402 aa31.85■■■□□ 2.69
CCM2-201ENST00000258781 SPDYE6P0CI01 402 aa31.85■■■□□ 2.69
CCM2-201ENST00000258781 EIF6P56537 245 aaKnown RBP31.85■■■□□ 2.69
CCM2-201ENST00000258781 FMR1NBQ8N0W7 255 aaPredicted RBP31.85■■■□□ 2.69
CCM2-201ENST00000258781 SWAP70Q9UH65 585 aa31.85■■■□□ 2.69
CCM2-201ENST00000258781 SCG2P13521 617 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 CMA1P23946 247 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 KRT2P35908 639 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 TYRO3Q06418 890 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 PFKFB3Q16875 520 aaPredicted RBP31.84■■■□□ 2.69
CCM2-201ENST00000258781 STX8Q9UNK0 236 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 CKAP2LQ8IYA6 745 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 PDLIM2Q96JY6 352 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 BRMS1Q9HCU9 246 aa31.84■■■□□ 2.69
CCM2-201ENST00000258781 hCG_1642624A0A1W2PR95 340 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 NR5A1Q13285 461 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 OXER1Q8TDS5 423 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 FAM198AQ9UFP1 575 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 MAD2L2Q9UI95 211 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 GJA3Q9Y6H8 435 aa31.83■■■□□ 2.69
CCM2-201ENST00000258781 TOB1P50616 345 aaPredicted RBP31.82■■■□□ 2.69
CCM2-201ENST00000258781 ZFPM1Q8IX07 1006 aa31.82■■■□□ 2.69
CCM2-201ENST00000258781 LZTS2Q9BRK4 669 aa31.82■■■□□ 2.69
CCM2-201ENST00000258781 IDI2Q9BXS1 227 aa31.82■■■□□ 2.69
CCM2-201ENST00000258781 SIPA1L1O43166 1804 aa31.82■■■□□ 2.68
CCM2-201ENST00000258781 BAZ2BQ9UIF8 2168 aaKnown RBP31.82■■■□□ 2.68
CCM2-201ENST00000258781 TOP1P11387 765 aaKnown RBP31.82■■■□□ 2.68
CCM2-201ENST00000258781 SERPINB13Q9UIV8 391 aa31.82■■■□□ 2.68
CCM2-201ENST00000258781 SOCS7O14512 581 aa31.81■■■□□ 2.68
CCM2-201ENST00000258781 DLGAP5Q15398 846 aa31.81■■■□□ 2.68
CCM2-201ENST00000258781 MRVI1Q9Y6F6 885 aa31.81■■■□□ 2.68
CCM2-201ENST00000258781 A0A1B0GVL5 298 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 PALM3A6NDB9 673 aaPredicted RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 HLA-DOAP06340 250 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 GMPSP49915 693 aaPredicted RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 NDUFA8P51970 172 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 SASS6Q6UVJ0 657 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 GREB1LQ9C091 1923 aaPredicted RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 CUTAO60888 179 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 RPS12P25398 132 aaKnown RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 MARCKSP29966 332 aaPredicted RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 TCP10Q12799 353 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 STAG2Q8N3U4 1231 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 CEP95Q96GE4 821 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 EHD4Q9H223 541 aa31.8■■■□□ 2.68
CCM2-201ENST00000258781 MORC2Q9Y6X9 1032 aaPredicted RBP31.8■■■□□ 2.68
CCM2-201ENST00000258781 NPM3O75607 178 aaKnown RBP31.79■■■□□ 2.68
CCM2-201ENST00000258781 MTMR14Q8NCE2 650 aa31.79■■■□□ 2.68
CCM2-201ENST00000258781 SH3GLB2Q9NR46 395 aa31.79■■■□□ 2.68
CCM2-201ENST00000258781 EGFRP00533 1210 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 ZBED3Q96IU2 234 aaPredicted RBP31.78■■■□□ 2.68
CCM2-201ENST00000258781 MYOZ2Q9NPC6 264 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 CEP131Q9UPN4 1083 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 FAM237AA0A1B0GTK4 181 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 CLRN2A0PK11 232 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 ZNF280AP59817 542 aaPredicted RBP31.78■■■□□ 2.68
CCM2-201ENST00000258781 NPY5RQ15761 445 aa31.78■■■□□ 2.68
CCM2-201ENST00000258781 IGKV6D-41A0A0C4DH26 115 aa31.77■■■□□ 2.68
CCM2-201ENST00000258781 FAM200AQ8TCP9 573 aa31.77■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms