RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 IFNAR1P17181 557 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 TECP42680 631 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 CDK8P49336 464 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 SMARCE1Q969G3 411 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 TMEM47Q9BQJ4 181 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 SH2D3AQ9BRG2 576 aa10.38□□□□□ -0.75
CKAP2-201ENST00000258607 NAT10Q9H0A0 1025 aaKnown RBP10.38□□□□□ -0.75
CKAP2-201ENST00000258607 DDX4Q9NQI0 724 aaKnown RBP10.38□□□□□ -0.75
CKAP2-201ENST00000258607 FAM205AQ6ZU69 1335 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 PSDA5PKW4 1024 aaPredicted RBP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 METTL16Q86W50 562 aaKnown RBP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 CDAN1Q8IWY9 1227 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 FUCA2Q9BTY2 467 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 A0A087X0B3 334 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 PPARDQ03181 441 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 AXDND1Q5T1B0 1012 aaPredicted RBP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 RRAGBQ5VZM2 374 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 BRAPQ7Z569 592 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 WDR66Q8TBY9 1149 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 SEC63Q9UGP8 760 aaKnown RBP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 ITGB4P16144 1822 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 DOT1LQ8TEK3 1739 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 LAMA2P24043 3122 aaKnown RBP10.37□□□□□ -0.75
CKAP2-201ENST00000258607 PPIP5K2O43314 1243 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 SP4Q02446 784 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 TROAPQ12815 778 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 PDLIM2Q96JY6 352 aa10.37□□□□□ -0.75
CKAP2-201ENST00000258607 TRIM49BA6NDI0 452 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 SCG2P13521 617 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 TPM4P67936 248 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 DGKZQ13574 1117 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 MAEAQ7L5Y9 396 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 CERS5Q8N5B7 392 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 CTNND2Q9UQB3 1225 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 GDAQ9Y2T3 454 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 GJA3Q9Y6H8 435 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 NUP98P52948 1817 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 SALL1Q9NSC2 1324 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L15C9J2P7 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L13C9JLJ4 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L11C9JVI0 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L18D6R9N7 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L22D6RA61 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L17D6RBQ6 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L19D6RCP7 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L20D6RJB6 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 CHMP2AO43633 222 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 UBA7P41226 1012 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 FMR1Q06787 632 aaKnown RBP eCLIP10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L24Q0WX57 530 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 PTPROQ16827 1216 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 SPTY2D1Q68D10 685 aaPredicted RBP10.36□□□□□ -0.75
CKAP2-201ENST00000258607 USP17L6PQ6QN14 398 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 WASF1Q92558 559 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 AGXT2Q9BYV1 514 aa10.36□□□□□ -0.75
CKAP2-201ENST00000258607 SFPQP23246 707 aaKnown RBP eCLIP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 LIFRP42702 1097 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 FANCCQ00597 558 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 POSTNQ15063 836 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 DHX40Q8IX18 779 aaKnown RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 TMEM60Q9H2L4 133 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 DAGLAQ9Y4D2 1042 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PDE4DIPQ5VU43 2346 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PHLPP1O60346 1717 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 SMCO2A6NFE2 343 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 FKBP15Q5T1M5 1219 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 CPXCR1Q8N123 301 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 ENGASEQ8NFI3 743 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 MMRN2Q9H8L6 949 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 LZTFL1Q9NQ48 299 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 ZBTB21Q9ULJ3 1066 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 BCS1LQ9Y276 419 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 ELP1O95163 1332 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 MYH13Q9UKX3 1938 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 SHTN1A0MZ66 631 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 POTEMA6NI47 508 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 RIOK3O14730 519 aaKnown RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PARP1P09874 1014 aaKnown RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 STAT6P42226 847 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PLS1Q14651 629 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 LRRC41Q15345 812 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PKN1Q16512 942 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 KRBA2Q6ZNG9 492 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 TFR2Q9UP52 801 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 SIPA1L3O60292 1781 aaPredicted RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 SPEF2Q9C093 1822 aa10.35□□□□□ -0.75
CKAP2-201ENST00000258607 PARP4Q9UKK3 1724 aaKnown RBP10.35□□□□□ -0.75
CKAP2-201ENST00000258607 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CYTH3O43739 400 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 TOP1P11387 765 aaKnown RBP10.34□□□□□ -0.75
CKAP2-201ENST00000258607 SEC23AQ15436 765 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 WWC2Q6AWC2 1192 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 CCDC174Q6PII3 467 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 DLK2Q6UY11 383 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 EPC1Q9H2F5 836 aa10.34□□□□□ -0.75
CKAP2-201ENST00000258607 TAB2Q9NYJ8 693 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms