RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 FERMT3Q86UX7 667 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 WASF1Q92558 559 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 CHAMP1Q96JM3 812 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 ALG1Q9BT22 464 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 ZSCAN16Q9H4T2 348 aaPredicted RBP10.98□□□□□ -0.65
NIP7-202ENST00000254941 MAD2L2Q9UI95 211 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
NIP7-202ENST00000254941 GNAQP50148 359 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 C9orf131Q5VYM1 1079 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 SRBD1Q8N5C6 995 aaKnown RBP10.98□□□□□ -0.65
NIP7-202ENST00000254941 AIFM3Q96NN9 605 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 KANSL2Q9H9L4 492 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.98□□□□□ -0.65
NIP7-202ENST00000254941 HACL1Q9UJ83 578 aa10.98□□□□□ -0.65
NIP7-202ENST00000254941 PALM3A6NDB9 673 aaPredicted RBP10.97□□□□□ -0.65
NIP7-202ENST00000254941 UBE2Q2LH0YL09 131 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
NIP7-202ENST00000254941 PTMSP20962 102 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 GUCY1A2P33402 732 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 RESTQ13127 1097 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 STAG2Q8N3U4 1231 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 MKL1Q969V6 931 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 TEPSINQ96N21 525 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 ANP32EQ9BTT0 268 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 GJB4Q9NTQ9 266 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 NYAP2Q9P242 653 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 CLIP2Q9UDT6 1046 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 ASTN2O75129 1339 aaPredicted RBP10.97□□□□□ -0.65
NIP7-202ENST00000254941 CNTNAP5Q8WYK1 1306 aa10.97□□□□□ -0.65
NIP7-202ENST00000254941 SNHG28P0DPA3 235 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 PDHBP11177 359 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 EPS15P42566 896 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 FOSBP53539 338 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 AKAP17AQ02040 695 aaKnown RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 GUCY1B3Q02153 619 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 RRP1BQ14684 758 aaKnown RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 PKN1Q16512 942 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 GPR162Q16538 588 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 SHROOM1Q2M3G4 852 aaPredicted RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 FOXD4L6Q3SYB3 417 aaPredicted RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 FOXD4L3Q6VB84 417 aaPredicted RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 TRPM4Q8TD43 1214 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
NIP7-202ENST00000254941 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
NIP7-202ENST00000254941 GRIN3BO60391 1043 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 GDF11O95390 407 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 PARP1P09874 1014 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 DNM1Q05193 864 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 TRIM29Q14134 588 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 SEPT2Q15019 361 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 KRT40Q6A162 431 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 OTUD7BQ6GQQ9 843 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 SIAH1Q8IUQ4 282 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 APOBEC3FQ8IUX4 373 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 DEFB129Q9H1M3 183 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 CABP5Q9NP86 173 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 LMBRD1Q9NUN5 540 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 SCN4AP35499 1836 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 KLRF2D3W0D1 207 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 GH2P01242 217 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 SMARCA1P28370 1054 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 HIRAP54198 1017 aaPredicted RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 JAG1P78504 1218 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 ICA1Q05084 483 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 ANGEL2Q5VTE6 544 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 DPY19L2Q6NUT2 758 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 USP17L2Q6R6M4 530 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 SPZ1Q9BXG8 430 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 SCAF8Q9UPN6 1271 aaKnown RBP10.95□□□□□ -0.66
NIP7-202ENST00000254941 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
NIP7-202ENST00000254941 USP17L5A8MUK1 530 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 CYTH3O43739 400 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 LMOD1P29536 600 aaPredicted RBP10.94□□□□□ -0.66
NIP7-202ENST00000254941 KRT85P78386 507 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 ASPRV1Q53RT3 343 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 FAM173BQ6P4H8 233 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 TMEM87AQ8NBN3 555 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 ADARB2Q9NS39 739 aaKnown RBP10.94□□□□□ -0.66
NIP7-202ENST00000254941 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 CNPY2Q9Y2B0 182 aa10.94□□□□□ -0.66
NIP7-202ENST00000254941 hCG_1642624A0A1W2PR95 340 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
NIP7-202ENST00000254941 MMP1P03956 469 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 GOLGA8HP0CJ92 632 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 SCG2P13521 617 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 XBP1P17861 261 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 U2AF2P26368 475 aaKnown RBP eCLIP10.93□□□□□ -0.663e-6■■■■□ 21.4
NIP7-202ENST00000254941 CAP2P40123 477 aa10.93□□□□□ -0.66
NIP7-202ENST00000254941 ATP2B2Q01814 1243 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms