RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 EGFRP00533 1210 aa4.59□□□□□ -1.67
RBM39-201ENST00000253363 IL6STP40189 918 aaPredicted RBP4.59□□□□□ -1.67
RBM39-201ENST00000253363 TTC39BQ5VTQ0 682 aaPredicted RBP4.59□□□□□ -1.67
RBM39-201ENST00000253363 EGFLAMQ63HQ2 1017 aa4.59□□□□□ -1.67
RBM39-201ENST00000253363 LINC00116Q8NCU8 138 aa4.59□□□□□ -1.67
RBM39-201ENST00000253363 TMEM74Q96NL1 305 aa4.59□□□□□ -1.67
RBM39-201ENST00000253363 GPC6Q9Y625 555 aaPredicted RBP4.59□□□□□ -1.67
RBM39-201ENST00000253363 TNRC6CQ9HCJ0 1690 aaKnown RBP4.59□□□□□ -1.67
RBM39-201ENST00000253363 CHD4Q14839 1912 aa4.59□□□□□ -1.68
RBM39-201ENST00000253363 K7ELQ4 463 aaPredicted RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 ENC1O14682 589 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 PTMAP06454 111 aaKnown RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 RARAP10276 462 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 RFC4P35249 363 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 ZNF157P51786 506 aaPredicted RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 NFE2L2Q16236 605 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 ZNF746Q6NUN9 644 aaPredicted RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 CLEC4GQ6UXB4 293 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 DTHD1Q6ZMT9 781 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 HNRNPLLQ8WVV9 542 aaKnown RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 PLD4Q96BZ4 506 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 ANAPC16Q96DE5 110 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 SPACA7Q96KW9 195 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 RHOVQ96L33 236 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 ZFP42Q96MM3 310 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 GSX2Q9BZM3 304 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 CRISPLD1Q9H336 500 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 LIN7BQ9HAP6 207 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 ADCY9O60503 1353 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 PPFIA4O75335 1185 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 PARNO95453 639 aaKnown RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 EDN3P14138 238 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 NFKB1P19838 968 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 SPRED3Q2MJR0 410 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 KIAA0319Q5VV43 1072 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 NCAPG2Q86XI2 1143 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 COL23A1Q86Y22 540 aaPredicted RBP4.58□□□□□ -1.68
RBM39-201ENST00000253363 GOLM1Q8NBJ4 401 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 SYT17Q9BSW7 474 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 KANSL2Q9H9L4 492 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 NARFQ9UHQ1 456 aa4.58□□□□□ -1.68
RBM39-201ENST00000253363 U2SURPO15042 1029 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 ZBTB7AO95365 584 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 SNRPA1P09661 255 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 DEKP35659 375 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 CRKLP46109 303 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 SERINC3Q13530 473 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 WDR44Q5JSH3 913 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 CC2D1BQ5T0F9 858 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 RASIP1Q5U651 963 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 ANKS3Q6ZW76 656 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 TRIM46Q7Z4K8 759 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 FAM169BQ8N8A8 192 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 PHC3Q8NDX5 983 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 OR13H1Q8NG92 308 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 FBXO27Q8NI29 283 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 OSMRQ99650 979 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 LTBP3Q9NS15 1303 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 FAM221BA6H8Z2 402 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 PHF20L1A8MW92 1017 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 ERVV-1B6SEH8 477 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 KHNYNO15037 678 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 PF4P02776 101 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 CYP19A1P11511 503 aaPredicted RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 PAX3P23760 479 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 PRKAR2BP31323 418 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 TNNT2P45379 298 aaPredicted RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 ITPK1Q13572 414 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 WDR43Q15061 677 aaKnown RBP eCLIP4.57□□□□□ -1.683e-7■■□□□ 11.8
RBM39-201ENST00000253363 MTHFSDQ2M296 383 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 HSP90AB3PQ58FF7 597 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 KANK3Q6NY19 840 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 ZNF790Q6PG37 636 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 ADAMTSL4Q6UY14 1074 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 RIPOR1Q6ZS17 1223 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 MORC4Q8TE76 937 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 NYXQ9GZU5 481 aa4.57□□□□□ -1.68
RBM39-201ENST00000253363 BRCA1P38398 1863 aaKnown RBP4.57□□□□□ -1.68
RBM39-201ENST00000253363 TMEM238LA0A1B0GVL6 79 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 TLR3O15455 904 aaKnown RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 EFSO43281 561 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 F11P03951 625 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 U2AF1L5P0DN76 240 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 GARTP22102 1010 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 PDE6BP35913 854 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 ST5P78524 1137 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 U2AF1Q01081 240 aaKnown RBP eCLIP4.56□□□□□ -1.682e-21■□□□□ 10.6
RBM39-201ENST00000253363 MLLT1Q03111 559 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 FAAP100Q0VG06 881 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 TAF7Q15545 349 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 BNC2Q6ZN30 1099 aaPredicted RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 CCNJLQ8IV13 435 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 CKAP2LQ8IYA6 745 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 CELF2-AS1Q8N7Q2 184 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 SRPK1Q96SB4 655 aaKnown RBP4.56□□□□□ -1.68
RBM39-201ENST00000253363 SLC30A3Q99726 388 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 RSRP1Q9BUV0 290 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 ASAP1Q9ULH1 1129 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 RPS6KL1Q9Y6S9 549 aa4.56□□□□□ -1.68
RBM39-201ENST00000253363 IL16Q14005 1332 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms