RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 CSRNP2Q9H175 543 aa16.9■□□□□ 0.3
MBD4-201ENST00000249910 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
MBD4-201ENST00000249910 CYTH3O43739 400 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 TYW1BQ6NUM6 668 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 GRAMD1CQ8IYS0 662 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 RASGRP4Q8TDF6 673 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 MAD2L2Q9UI95 211 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 KIAA1551Q9HCM1 1747 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 TRIM75PA6NK02 468 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 LRMPQ12912 555 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 PFKFB3Q16875 520 aaPredicted RBP16.89■□□□□ 0.29
MBD4-201ENST00000249910 EPSTI1Q96J88 318 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 PYCARDQ9ULZ3 195 aa16.89■□□□□ 0.29
MBD4-201ENST00000249910 KIF5BP33176 963 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 KRBA2Q6ZNG9 492 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 FAM163AQ96GL9 167 aaPredicted RBP16.88■□□□□ 0.29
MBD4-201ENST00000249910 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
MBD4-201ENST00000249910 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 PCDHA5Q9Y5H7 936 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 G3V3G9 751 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 ALDH1B1P30837 517 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 CCDC144BQ3MJ40 725 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 DCAF8Q5TAQ9 597 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 C16orf86Q6ZW13 317 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 TNFRSF25Q93038 417 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 CEP95Q96GE4 821 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 NAT10Q9H0A0 1025 aaKnown RBP16.88■□□□□ 0.29
MBD4-201ENST00000249910 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
MBD4-201ENST00000249910 SRPRBQ9Y5M8 271 aaKnown RBP16.88■□□□□ 0.29
MBD4-201ENST00000249910 GAKO14976 1311 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 OFD1O75665 1012 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 RXRBP28702 533 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 CHRNA5P30532 468 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 PDE6BP35913 854 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
MBD4-201ENST00000249910 USP17L2Q6R6M4 530 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 TIGD1Q96MW7 591 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 FAM205AQ6ZU69 1335 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 ROBO3Q96MS0 1386 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 FAM237AA0A1B0GTK4 181 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 PLCG2P16885 1265 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 MASTLQ96GX5 879 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
MBD4-201ENST00000249910 MYH6P13533 1939 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 BRD2P25440 801 aaKnown RBP16.86■□□□□ 0.29
MBD4-201ENST00000249910 NLRP12P59046 1061 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 ARID5BQ14865 1188 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 A0A087X0B3 334 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 BMP6P22004 513 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 MCM7P33993 719 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 PTGDRQ13258 359 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 TMC4Q7Z404 712 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 SLF2Q8IX21 1173 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 VAT1LQ9HCJ6 419 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 FAM13BQ9NYF5 915 aa16.86■□□□□ 0.29
MBD4-201ENST00000249910 R3HCC1Q9Y3T6 440 aaKnown RBP16.86■□□□□ 0.29
MBD4-201ENST00000249910 GOLGA6L6A8MZA4 724 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 CACNB3P54284 484 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 NOLC1Q14978 699 aaKnown RBP eCLIP16.85■□□□□ 0.29
MBD4-201ENST00000249910 HEATR3Q7Z4Q2 680 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 FILIP1Q7Z7B0 1213 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 HOMER1Q86YM7 354 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 ANKS1AQ92625 1134 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 PDGFDQ9GZP0 370 aaPredicted RBP16.85■□□□□ 0.29
MBD4-201ENST00000249910 TUBE1Q9UJT0 475 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 CEP131Q9UPN4 1083 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 MAST2Q6P0Q8 1798 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 VWA3AA6NCI4 1184 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 CASP1P29466 404 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
MBD4-201ENST00000249910 EN1Q05925 392 aaPredicted RBP16.85■□□□□ 0.29
MBD4-201ENST00000249910 NFIAQ12857 509 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 GRM4Q14833 912 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 TTC38Q5R3I4 469 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 KIAA0825Q8IV33 1275 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 TMX4Q9H1E5 349 aaPredicted RBP16.85■□□□□ 0.29
MBD4-201ENST00000249910 TCP11L1Q9NUJ3 509 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 USP40Q9NVE5 1235 aa16.85■□□□□ 0.29
MBD4-201ENST00000249910 MDM2Q00987 491 aaPredicted RBP16.84■□□□□ 0.29
MBD4-201ENST00000249910 NCAPHQ15003 741 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 HSP90AA4PQ58FG1 418 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 ZNF287Q9HBT7 754 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 SNED1Q8TER0 1413 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 ATP1A3P13637 1013 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 CDC25AP30304 524 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 EZH2Q15910 746 aaKnown RBP16.84■□□□□ 0.29
MBD4-201ENST00000249910 WWC2Q6AWC2 1192 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 SYMPKQ92797 1274 aaKnown RBP16.84■□□□□ 0.29
MBD4-201ENST00000249910 DHX58Q96C10 678 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
MBD4-201ENST00000249910 PALM3A6NDB9 673 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms