RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 IGKV6D-41A0A0C4DH26 115 aa21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 PARP1P09874 1014 aaKnown RBP21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 ATL3Q6DD88 541 aa21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 SRBD1Q8N5C6 995 aaKnown RBP21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 CABP5Q9NP86 173 aa21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 ZNF541Q9H0D2 1346 aa21.67■■□□□ 1.06
TNFSF9-201ENST00000245817 SHTN1A0MZ66 631 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 GUCY1A2P33402 732 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 FUT2Q10981 343 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 ABCB5Q2M3G0 1257 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 KLHL40Q2TBA0 621 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 KANSL2Q9H9L4 492 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 GJB4Q9NTQ9 266 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 MAD2L2Q9UI95 211 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 ZC3H4Q9UPT8 1303 aaKnown RBP21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 MBD3O95983 291 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 TMEM179Q6ZVK1 233 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 GPC2Q8N158 579 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 SPATA32Q96LK8 384 aa21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 TFIP11Q9UBB9 837 aaKnown RBP21.66■■□□□ 1.06
TNFSF9-201ENST00000245817 KIF23Q02241 960 aaPredicted RBP21.65■■□□□ 1.06
TNFSF9-201ENST00000245817 KIF4BQ2VIQ3 1234 aa21.65■■□□□ 1.06
TNFSF9-201ENST00000245817 TBC1D10BQ4KMP7 808 aaPredicted RBP21.65■■□□□ 1.06
TNFSF9-201ENST00000245817 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
TNFSF9-201ENST00000245817 CNTNAP1P78357 1384 aa21.65■■□□□ 1.06
TNFSF9-201ENST00000245817 CNTNAP5Q8WYK1 1306 aa21.64■■□□□ 1.06
TNFSF9-201ENST00000245817 PALM3A6NDB9 673 aaPredicted RBP21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 UBE2Q2LH0YL09 131 aa21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 SLURP2P0DP57 97 aa21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 SAMD7Q7Z3H4 446 aa21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 STAG2Q8N3U4 1231 aa21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 TMEM39BQ9GZU3 492 aa21.64■■□□□ 1.05
TNFSF9-201ENST00000245817 KLRF2D3W0D1 207 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 MMP1P03956 469 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 LRRC47Q8N1G4 583 aaKnown RBP21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 GOLGA6L4A6NEF3 574 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 GDF11O95390 407 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 UBE2HP62256 183 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 PKN1Q16512 942 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 GZF1Q9H116 711 aaPredicted RBP21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 BRMS1Q9HCU9 246 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 NYAP2Q9P242 653 aa21.63■■□□□ 1.05
TNFSF9-201ENST00000245817 MYH8P13535 1937 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 hCG_1642624A0A1W2PR95 340 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 TBC1D12O60347 775 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 GOLGA8HP0CJ92 632 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 SCG2P13521 617 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 ICA1Q05084 483 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 RASA3Q14644 834 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 ASPRV1Q53RT3 343 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 USP17L2Q6R6M4 530 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 PIBF1Q8WXW3 757 aa21.62■■□□□ 1.05
TNFSF9-201ENST00000245817 USP17L5A8MUK1 530 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 PDHBP11177 359 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 SMARCA1P28370 1054 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 SEPT2Q15019 361 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 PFKFB3Q16875 520 aaPredicted RBP21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 CLEC10AQ8IUN9 316 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 VPS54Q9P1Q0 977 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 KCNJ14Q9UNX9 436 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 ELP1O95163 1332 aa21.61■■□□□ 1.05
TNFSF9-201ENST00000245817 EGFRP00533 1210 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 GH2P01242 217 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 EEF2P13639 858 aaKnown RBP21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 CEBPZQ03701 1054 aaKnown RBP21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 LEO1Q8WVC0 666 aaPredicted RBP21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 FOXP1Q9H334 677 aaPredicted RBP21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 GPRC5DQ9NZD1 345 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 HACL1Q9UJ83 578 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 KIF28PB7ZC32 967 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 RAD21O60216 631 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 U2AF2P26368 475 aaKnown RBP eCLIP21.6■■□□□ 1.054e-8■■■■□ 24.4
TNFSF9-201ENST00000245817 MYSM1Q5VVJ2 828 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 DIS3L2Q8IYB7 885 aaKnown RBP21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 GPT2Q8TD30 523 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 MKL1Q969V6 931 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 SPZ1Q9BXG8 430 aa21.6■■□□□ 1.05
TNFSF9-201ENST00000245817 GLTPD2A6NH11 291 aa21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 GADD45BO75293 160 aaPredicted RBP21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 TPRNQ4KMQ1 711 aa21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 GPATCH4Q5T3I0 446 aaKnown RBP21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 MIGA2Q7L4E1 593 aa21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 RRP36Q96EU6 259 aaKnown RBP21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 SEC63Q9UGP8 760 aaKnown RBP21.59■■□□□ 1.05
TNFSF9-201ENST00000245817 SIPA1L1O43166 1804 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 DDNO94850 711 aaPredicted RBP21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 LMOD1P29536 600 aaPredicted RBP21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 KRT2P35908 639 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 NLRP5P59047 1200 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 GSE1Q14687 1217 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 CCDC96Q2M329 555 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 CAVIN1Q6NZI2 390 aaKnown RBP21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 NOSTRINQ8IVI9 506 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 SYAP1Q96A49 352 aaPredicted RBP21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 PHF20Q9BVI0 1012 aa21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 ISY1Q9ULR0 285 aaKnown RBP21.58■■□□□ 1.05
TNFSF9-201ENST00000245817 FRMPD2Q68DX3 1309 aaPredicted RBP21.58■■□□□ 1.04
TNFSF9-201ENST00000245817 BTBD18B2RXH4 712 aa21.57■■□□□ 1.04
TNFSF9-201ENST00000245817 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms