RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 FMR1NBQ8N0W7 255 aaPredicted RBP12.97□□□□□ -0.33
SOX9-201ENST00000245479 TAB2Q9NYJ8 693 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 OPA1O60313 960 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 ARID5AQ03989 594 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 DHX40Q8IX18 779 aaKnown RBP12.97□□□□□ -0.33
SOX9-201ENST00000245479 SMARCC2Q8TAQ2 1214 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 WASF1Q92558 559 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.97□□□□□ -0.33
SOX9-201ENST00000245479 RNF41Q9H4P4 317 aaPredicted RBP12.97□□□□□ -0.33
SOX9-201ENST00000245479 RTEL1Q9NZ71 1219 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 NRXN3Q9Y4C0 1643 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 SPECC1LQ69YQ0 1117 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
SOX9-201ENST00000245479 PP2D1A8MPX8 630 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 EZRP15311 586 aaKnown RBP12.96□□□□□ -0.33
SOX9-201ENST00000245479 VEGFAP15692 232 aaPredicted RBP12.96□□□□□ -0.33
SOX9-201ENST00000245479 UBA7P41226 1012 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 ADGRA1Q86SQ6 560 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 CLEC10AQ8IUN9 316 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 SCLT1Q96NL6 688 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 LOC102724159A0A0B4J2E5 919 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 GSG1L2A8MUP6 293 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 CLGNO14967 610 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 USO1O60763 962 aaKnown RBP12.96□□□□□ -0.33
SOX9-201ENST00000245479 MAGEA9P43362 315 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 IQCB1Q15051 598 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 POSTNQ15063 836 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 PWP2Q15269 919 aaKnown RBP12.96□□□□□ -0.33
SOX9-201ENST00000245479 CCDC114Q96M63 670 aa12.96□□□□□ -0.33
SOX9-201ENST00000245479 UBAP1LF5GYI3 381 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 CCT5P48643 541 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 SLC39A14Q15043 492 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 POTEDQ86YR6 584 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 CTAGE1Q96RT6 745 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 CEP89Q96ST8 783 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 TBC1D7Q9P0N9 293 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 UTYO14607 1347 aa12.96□□□□□ -0.34
SOX9-201ENST00000245479 EIF3CLB5ME19 914 aaKnown RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 SLURP2P0DP57 97 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 TCP10Q12799 353 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 ITPK1Q13572 414 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 MTF1Q14872 753 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 KCTD19Q17RG1 926 aaPredicted RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 KANK3Q6NY19 840 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 LRP10Q7Z4F1 713 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 FAM71BQ8TC56 605 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 BCAS4Q8TDM0 211 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 EIF3CQ99613 913 aaKnown RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 GPCPD1Q9NPB8 672 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 CCZ1BP86790 482 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 CCZ1P86791 482 aaPredicted RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 PDE4BQ07343 736 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 PTGDRQ13258 359 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 SRGAP1Q7Z6B7 1085 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 SRLQ86TD4 932 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 CNGA4Q8IV77 575 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 ZMYM6O95789 1325 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 VIRMAQ69YN4 1812 aaKnown RBP12.95□□□□□ -0.34
SOX9-201ENST00000245479 CDK5RAP3Q96JB5 506 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 LY9Q9HBG7 655 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 CAPN7Q9Y6W3 813 aa12.95□□□□□ -0.34
SOX9-201ENST00000245479 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 INF2Q27J81 1249 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CCDC96Q2M329 555 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 E4F1Q66K89 784 aaPredicted RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 DYMQ7RTS9 669 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 LRRN4CLQ8ND94 238 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 SYMPKQ92797 1274 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 GOLGA6BA6NDN3 693 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 TFRCP02786 760 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 SCNN1DP51172 638 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 RNASE9P60153 205 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 TXNRD3Q86VQ6 643 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 EHBP1Q8NDI1 1231 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 LUC7LQ9NQ29 371 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 FRMPD2Q68DX3 1309 aaPredicted RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 CIAO1O76071 339 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CMA1P23946 247 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 EPS15P42566 896 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 NAA25Q14CX7 972 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CCDC122Q5T0U0 273 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 MSL1Q68DK7 614 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 EFCAB13Q8IY85 973 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 RGS22Q8NE09 1264 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 TMEM87BQ96K49 555 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 TFR2Q9UP52 801 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 TRIM21P19474 475 aaKnown RBP12.94□□□□□ -0.34
SOX9-201ENST00000245479 KRT2P35908 639 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 STAT6P42226 847 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 WWC2Q6AWC2 1192 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 CCDC121Q6ZUS5 278 aa12.94□□□□□ -0.34
SOX9-201ENST00000245479 B4GALNT4Q76KP1 1039 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms