RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 SIAH1Q8IUQ4 282 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 AIFM3Q96NN9 605 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 TRIM34Q9BYJ4 488 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 KAT14Q9H8E8 782 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 GJB4Q9NTQ9 266 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 CCDC39Q9UFE4 941 aa11.78□□□□□ -0.52
PRAMEF4-201ENST00000235349 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 GRIN3BO60391 1043 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZSCAN22P10073 491 aaPredicted RBP11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 NT5C2P49902 561 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 GUCY1B3Q02153 619 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 FUT2Q10981 343 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 SEPT2Q15019 361 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 FOXD4L6Q3SYB3 417 aaPredicted RBP11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 OTUD7BQ6GQQ9 843 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 DLK2Q6UY11 383 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 FOXD4L3Q6VB84 417 aaPredicted RBP11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 NBPF11Q86T75 865 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 STAG2Q8N3U4 1231 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 FAM184AQ8NB25 1140 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 CCDC17Q96LX7 622 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.52
PRAMEF4-201ENST00000235349 NID2Q14112 1375 aa11.77□□□□□ -0.53
PRAMEF4-201ENST00000235349 hCG_1642624A0A1W2PR95 340 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 DDAH1O94760 285 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 TOP1P11387 765 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 RCAN1P53805 252 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 HMGN5P82970 282 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 SRBD1Q8N5C6 995 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 TAOK2Q9UL54 1235 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 WDR33Q9C0J8 1336 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 PLIN4Q96Q06 1357 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 GH2P01242 217 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 IFNAR1P17181 557 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 TNNI2P48788 182 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 ATP2B2Q01814 1243 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 MAP3K10Q02779 954 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 ABCB5Q2M3G0 1257 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 SLC35G1Q2M3R5 365 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 NBPF12Q5TAG4 269 aaPredicted RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 LRRC47Q8N1G4 583 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
PRAMEF4-201ENST00000235349 USP17L5A8MUK1 530 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 TBC1D12O60347 775 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 GOLGA8HP0CJ92 632 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 CALM1P0DP23 149 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 CALM2P0DP24 149 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 CALM3P0DP25 149 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 PDCP20941 246 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 SSRP1Q08945 709 aaKnown RBP11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 GRM4Q14833 912 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 MCTP1Q6DN14 999 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 DPY19L2Q6NUT2 758 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 USP17L2Q6R6M4 530 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 MAD2L2Q9UI95 211 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 ZKSCAN5Q9Y2L8 839 aa11.75□□□□□ -0.53
PRAMEF4-201ENST00000235349 CCDC196A0A1B0GTZ2 297 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 TTLL1O95922 423 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 F13A1P00488 732 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 EEF2P13639 858 aaKnown RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 VEGFAP15692 232 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 CPLX2Q6PUV4 134 aaKnown RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 TMTC3Q6ZXV5 915 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 PIBF1Q8WXW3 757 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 ADARB2Q9NS39 739 aaKnown RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 GGA3Q9NZ52 723 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 FZD1Q9UP38 647 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 V9GY48 417 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 PALM3A6NDB9 673 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 PHF20L1A8MW92 1017 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 H3BQV1 296 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 CDKL5O76039 1030 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 TNFAIP1Q13829 316 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 PKN1Q16512 942 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 CAVIN1Q6NZI2 390 aaKnown RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 CTCFLQ8NI51 663 aaPredicted RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 RBM28Q9NW13 759 aaKnown RBP11.74□□□□□ -0.53
PRAMEF4-201ENST00000235349 ATAD5Q96QE3 1844 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 POTECB2RU33 542 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 DMTNQ08495 405 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 TMEM179Q6ZVK1 233 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms