RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 BTBD7Q9P203 1132 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 STAP2Q9UGK3 403 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 TMX2Q9Y320 296 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 MGAMO43451 1857 aa17.01■□□□□ 0.31
GPN3-201ENST00000228827 RAD21O60216 631 aa17■□□□□ 0.31
GPN3-201ENST00000228827 RASA1P20936 1047 aa17■□□□□ 0.31
GPN3-201ENST00000228827 TRIM32Q13049 653 aa17■□□□□ 0.31
GPN3-201ENST00000228827 PRPF38BQ5VTL8 546 aaKnown RBP17■□□□□ 0.31
GPN3-201ENST00000228827 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
GPN3-201ENST00000228827 GPR142Q7Z601 462 aa17■□□□□ 0.31
GPN3-201ENST00000228827 PLEKHH3Q7Z736 793 aa17■□□□□ 0.31
GPN3-201ENST00000228827 NKX2-3Q8TAU0 364 aa17■□□□□ 0.31
GPN3-201ENST00000228827 NUDT12Q9BQG2 462 aa17■□□□□ 0.31
GPN3-201ENST00000228827 VCPKMTQ9H867 229 aa17■□□□□ 0.31
GPN3-201ENST00000228827 RBBP6Q7Z6E9 1792 aaKnown RBP17■□□□□ 0.31
GPN3-201ENST00000228827 MYH7P12883 1935 aa17■□□□□ 0.31
GPN3-201ENST00000228827 BRCA2P51587 3418 aa17■□□□□ 0.31
GPN3-201ENST00000228827 PRDM1O75626 825 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 HMGCRP04035 888 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 GJA8P48165 433 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 CCNA1P78396 465 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 COG2Q14746 738 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 U2AF1L4Q8WU68 220 aaKnown RBP16.99■□□□□ 0.31
GPN3-201ENST00000228827 SOCS4Q8WXH5 440 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 LPAR1Q92633 364 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 EVI5LQ96CN4 794 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
GPN3-201ENST00000228827 NACAP1Q9BZK3 213 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 KANSL2Q9H9L4 492 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 BAZ2AQ9UIF9 1905 aaKnown RBP16.99■□□□□ 0.31
GPN3-201ENST00000228827 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 TRIB2Q92519 343 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 DEFB118Q96PH6 123 aa16.99■□□□□ 0.31
GPN3-201ENST00000228827 ROBO3Q96MS0 1386 aa16.98■□□□□ 0.31
GPN3-201ENST00000228827 FLOT1O75955 427 aa16.98■□□□□ 0.31
GPN3-201ENST00000228827 IRX6P78412 446 aaPredicted RBP16.98■□□□□ 0.31
GPN3-201ENST00000228827 MORN1Q5T089 497 aa16.98■□□□□ 0.31
GPN3-201ENST00000228827 NAPBQ9H115 298 aa16.98■□□□□ 0.31
GPN3-201ENST00000228827 HOXC10Q9NYD6 342 aa16.98■□□□□ 0.31
GPN3-201ENST00000228827 WDR46O15213 610 aaKnown RBP16.97■□□□□ 0.31
GPN3-201ENST00000228827 SGPL1O95470 568 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 TFRCP02786 760 aaKnown RBP16.97■□□□□ 0.31
GPN3-201ENST00000228827 RGS2P41220 211 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 CCL14Q16627 93 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 USP6NLQ92738 828 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 ATG4CQ96DT6 458 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.31
GPN3-201ENST00000228827 GOPCQ9HD26 462 aa16.97■□□□□ 0.31
GPN3-201ENST00000228827 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
GPN3-201ENST00000228827 ZKSCAN1P17029 563 aaPredicted RBP16.96■□□□□ 0.31
GPN3-201ENST00000228827 DSG3P32926 999 aa16.96■□□□□ 0.31
GPN3-201ENST00000228827 ZNF444Q8N0Y2 327 aaPredicted RBP16.96■□□□□ 0.31
GPN3-201ENST00000228827 RILPL2Q969X0 211 aa16.96■□□□□ 0.31
GPN3-201ENST00000228827 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
GPN3-201ENST00000228827 IVNS1ABPQ9Y6Y0 642 aa16.96■□□□□ 0.31
GPN3-201ENST00000228827 FOXP2O15409 715 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 XRCC5P13010 732 aaKnown RBP16.95■□□□□ 0.3
GPN3-201ENST00000228827 NUCB1Q02818 461 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 PPARAQ07869 468 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 MAP2K5Q13163 448 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 PLS1Q14651 629 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 FAM83BQ5T0W9 1011 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 VPS53Q5VIR6 699 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 FAM227BQ96M60 508 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 APBA2Q99767 749 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 MOV10L1Q9BXT6 1211 aaKnown RBP16.95■□□□□ 0.3
GPN3-201ENST00000228827 SPATC1LQ9H0A9 340 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 ZNF287Q9HBT7 754 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 HMX1Q9NP08 348 aaPredicted RBP16.95■□□□□ 0.3
GPN3-201ENST00000228827 FBXO28Q9NVF7 368 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
GPN3-201ENST00000228827 RPTORQ8N122 1335 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 A0A0D9SFI3 127 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 SLC15A5A6NIM6 579 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 FARP2O94887 1054 aaPredicted RBP16.94■□□□□ 0.3
GPN3-201ENST00000228827 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
GPN3-201ENST00000228827 PTPREP23469 700 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 CTDSPL2Q05D32 466 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 FAM47AQ5JRC9 791 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
GPN3-201ENST00000228827 HELLSQ9NRZ9 838 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 NYAP2Q9P242 653 aa16.94■□□□□ 0.3
GPN3-201ENST00000228827 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
GPN3-201ENST00000228827 IGKV6D-41A0A0C4DH26 115 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 SLC3A2P08195 630 aaKnown RBP16.93■□□□□ 0.3
GPN3-201ENST00000228827 ERCC3P19447 782 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 PDE4BQ07343 736 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
GPN3-201ENST00000228827 PLEKHM2Q8IWE5 1019 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 TRMT44Q8IYL2 757 aaKnown RBP16.93■□□□□ 0.3
GPN3-201ENST00000228827 F5H6K3 240 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 KLRC3Q07444 240 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 CACNB2Q08289 660 aaPredicted RBP16.93■□□□□ 0.3
GPN3-201ENST00000228827 GRB14Q14449 540 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 UBE2Q1Q7Z7E8 422 aa16.93■□□□□ 0.3
GPN3-201ENST00000228827 NCAPG2Q86XI2 1143 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms