RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 CLIP2Q9UDT6 1046 aa27.87■■■□□ 2.05
GSK3A-201ENST00000222330 DICER1Q9UPY3 1922 aaKnown RBP27.87■■■□□ 2.05
GSK3A-201ENST00000222330 CNTNAP1P78357 1384 aa27.87■■■□□ 2.05
GSK3A-201ENST00000222330 CERKLQ49MI3 558 aaPredicted RBP27.87■■■□□ 2.05
GSK3A-201ENST00000222330 CAVIN1Q6NZI2 390 aaKnown RBP27.87■■■□□ 2.05
GSK3A-201ENST00000222330 CDAN1Q8IWY9 1227 aa27.87■■■□□ 2.05
GSK3A-201ENST00000222330 LRRC47Q8N1G4 583 aaKnown RBP27.87■■■□□ 2.05
GSK3A-201ENST00000222330 SHISA4Q96DD7 197 aa27.87■■■□□ 2.05
GSK3A-201ENST00000222330 L1TD1Q5T7N2 865 aaKnown RBP27.86■■■□□ 2.05
GSK3A-201ENST00000222330 SPATA32Q96LK8 384 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 USP17L2Q6R6M4 530 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 LEO1Q8WVC0 666 aaPredicted RBP27.86■■■□□ 2.05
GSK3A-201ENST00000222330 FAM151AQ8WW52 585 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 USP28Q96RU2 1077 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 MAP3K14Q99558 947 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 TMEM39BQ9GZU3 492 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 RNF181Q9P0P0 153 aa27.86■■■□□ 2.05
GSK3A-201ENST00000222330 MYH15Q9Y2K3 1946 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 VEGFAP15692 232 aaPredicted RBP27.85■■■□□ 2.05
GSK3A-201ENST00000222330 ATP2B2Q01814 1243 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 SLC35G1Q2M3R5 365 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 TATDN1Q6P1N9 297 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 SAMD7Q7Z3H4 446 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 MICALL2Q8IY33 904 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 CPVLQ9H3G5 476 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 VPS54Q9P1Q0 977 aa27.85■■■□□ 2.05
GSK3A-201ENST00000222330 MYO1BO43795 1136 aa27.84■■■□□ 2.05
GSK3A-201ENST00000222330 GDF11O95390 407 aa27.84■■■□□ 2.05
GSK3A-201ENST00000222330 SCAND2PQ9GZW5 306 aaPredicted RBP27.84■■■□□ 2.05
GSK3A-201ENST00000222330 CNOT7Q9UIV1 285 aaKnown RBP27.84■■■□□ 2.05
GSK3A-201ENST00000222330 RPS12P25398 132 aaKnown RBP27.84■■■□□ 2.05
GSK3A-201ENST00000222330 ZNF280AP59817 542 aaPredicted RBP27.84■■■□□ 2.05
GSK3A-201ENST00000222330 CCDC17Q96LX7 622 aa27.84■■■□□ 2.05
GSK3A-201ENST00000222330 PALM3A6NDB9 673 aaPredicted RBP27.83■■■□□ 2.05
GSK3A-201ENST00000222330 USP17L5A8MUK1 530 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 TTLL1O95922 423 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 RRP1BQ14684 758 aaKnown RBP27.83■■■□□ 2.05
GSK3A-201ENST00000222330 CSPP1Q1MSJ5 1256 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 METTL16Q86W50 562 aaKnown RBP27.83■■■□□ 2.05
GSK3A-201ENST00000222330 CFAP45Q9UL16 551 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 UBE2HP62256 183 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 TBC1D10BQ4KMP7 808 aaPredicted RBP27.83■■■□□ 2.05
GSK3A-201ENST00000222330 C9orf131Q5VYM1 1079 aa27.83■■■□□ 2.05
GSK3A-201ENST00000222330 BTBD18B2RXH4 712 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 MMP1P03956 469 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 JAG1P78504 1218 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 GNL2Q13823 731 aaKnown RBP27.82■■■□□ 2.04
GSK3A-201ENST00000222330 RGS22Q8NE09 1264 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 KLRF2D3W0D1 207 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 CYTH3O43739 400 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 MBD3O95983 291 aa27.82■■■□□ 2.04
GSK3A-201ENST00000222330 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.82■■■□□ 2.04
GSK3A-201ENST00000222330 ASTN2O75129 1339 aaPredicted RBP27.82■■■□□ 2.04
GSK3A-201ENST00000222330 PARP1P09874 1014 aaKnown RBP27.81■■■□□ 2.04
GSK3A-201ENST00000222330 SEPT2Q15019 361 aa27.81■■■□□ 2.04
GSK3A-201ENST00000222330 MYSM1Q5VVJ2 828 aa27.81■■■□□ 2.04
GSK3A-201ENST00000222330 BRAPQ7Z569 592 aa27.81■■■□□ 2.04
GSK3A-201ENST00000222330 ZNF396Q96N95 335 aaPredicted RBP27.81■■■□□ 2.04
GSK3A-201ENST00000222330 COL2A1P02458 1487 aaPredicted RBP27.8■■■□□ 2.04
GSK3A-201ENST00000222330 DIS3L2Q8IYB7 885 aaKnown RBP27.8■■■□□ 2.04
GSK3A-201ENST00000222330 DPF2Q92785 391 aa27.8■■■□□ 2.04
GSK3A-201ENST00000222330 GREB1LQ9C091 1923 aaPredicted RBP27.8■■■□□ 2.04
GSK3A-201ENST00000222330 TMEM63CQ9P1W3 806 aa27.8■■■□□ 2.04
GSK3A-201ENST00000222330 FRMPD2Q68DX3 1309 aaPredicted RBP27.8■■■□□ 2.04
GSK3A-201ENST00000222330 GNAQP50148 359 aa27.8■■■□□ 2.04
GSK3A-201ENST00000222330 FKBP1CQ5VVH2 108 aa27.8■■■□□ 2.04
GSK3A-201ENST00000222330 OXER1Q8TDS5 423 aa27.8■■■□□ 2.04
GSK3A-201ENST00000222330 ELP1O95163 1332 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 PDHBP11177 359 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 U2AF2P26368 475 aaKnown RBP eCLIP27.79■■■□□ 2.04
GSK3A-201ENST00000222330 ABCB5Q2M3G0 1257 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 MIGA2Q7L4E1 593 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 CLIC4Q9Y696 253 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 NR5A1Q13285 461 aa27.79■■■□□ 2.04
GSK3A-201ENST00000222330 MYH4Q9Y623 1939 aa27.78■■■□□ 2.04
GSK3A-201ENST00000222330 SCG2P13521 617 aa27.78■■■□□ 2.04
GSK3A-201ENST00000222330 EEF2P13639 858 aaKnown RBP27.78■■■□□ 2.04
GSK3A-201ENST00000222330 SAFBQ15424 915 aaKnown RBP eCLIP27.78■■■□□ 2.04
GSK3A-201ENST00000222330 FAM83AQ86UY5 434 aa27.78■■■□□ 2.04
GSK3A-201ENST00000222330 PGBD1Q96JS3 809 aa27.78■■■□□ 2.04
GSK3A-201ENST00000222330 UBA5Q9GZZ9 404 aa27.78■■■□□ 2.04
GSK3A-201ENST00000222330 GH2P01242 217 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 PFKFB3Q16875 520 aaPredicted RBP27.77■■■□□ 2.04
GSK3A-201ENST00000222330 SIAH1Q8IUQ4 282 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 RCOR1Q9UKL0 485 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 FSD2A1L4K1 749 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 GPKOWQ92917 476 aaPredicted RBP eCLIP27.77■■■□□ 2.045e-6■■■□□ 14.8
GSK3A-201ENST00000222330 PHF20Q9BVI0 1012 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 VAT1LQ9HCJ6 419 aa27.77■■■□□ 2.04
GSK3A-201ENST00000222330 HERC5Q9UII4 1024 aaKnown RBP27.77■■■□□ 2.04
GSK3A-201ENST00000222330 XBP1P17861 261 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 RASA3Q14644 834 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 KANSL2Q9H9L4 492 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 PGAP2Q9UHJ9 254 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 RAD21O60216 631 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 ATL3Q6DD88 541 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 TMEM179Q6ZVK1 233 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 NOSTRINQ8IVI9 506 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 GPCPD1Q9NPB8 672 aa27.76■■■□□ 2.03
GSK3A-201ENST00000222330 GRIN3BO60391 1043 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms