RNA–Protein interactions for RNA: ENST00000221504.12

TRMT1-201, Transcript of tRNA methyltransferase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRMT1, Length 2,179 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-201ENST00000221504 TMEM232C9JQI7 657 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 SLFN14P0C7P3 912 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 ZNF18P17022 549 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 KIF5BP33176 963 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 NT5C2P49902 561 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 ZNF174Q15697 407 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 C12orf60Q5U649 245 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 USP21Q9UK80 565 aa17■□□□□ 0.31
TRMT1-201ENST00000221504 TOP1P11387 765 aaKnown RBP16.99■□□□□ 0.31
TRMT1-201ENST00000221504 USP5P45974 858 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 NLRP5P59047 1200 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 ATP2C1P98194 919 aaPredicted RBP16.99■□□□□ 0.31
TRMT1-201ENST00000221504 NCBP1Q09161 790 aaKnown RBP16.99■□□□□ 0.31
TRMT1-201ENST00000221504 SLC4A8Q2Y0W8 1093 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 TRAPPC3LQ5T215 181 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 SH3RF1Q7Z6J0 888 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 SLC51AQ86UW1 340 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 TRAPPC10P48553 1259 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 PLCD1P51178 756 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 TFAP4Q01664 338 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 NFIXQ14938 502 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 TRMT44Q8IYL2 757 aaKnown RBP16.99■□□□□ 0.31
TRMT1-201ENST00000221504 CNBD1Q8NA66 436 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 KIF18AQ8NI77 898 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 KAT14Q9H8E8 782 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
TRMT1-201ENST00000221504 XDHP47989 1333 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 ERCC5P28715 1186 aaPredicted RBP16.98■□□□□ 0.31
TRMT1-201ENST00000221504 PTGDRQ13258 359 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 DGKHQ86XP1 1220 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 SH3RF3Q8TEJ3 882 aaPredicted RBP16.98■□□□□ 0.31
TRMT1-201ENST00000221504 PAGE5Q96GU1 130 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 TMX1Q9H3N1 280 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 NAV1Q8NEY1 1877 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 VEGFAP15692 232 aaPredicted RBP16.98■□□□□ 0.31
TRMT1-201ENST00000221504 GSTO1P78417 241 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 HSP90AA4PQ58FG1 418 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 PIK3AP1Q6ZUJ8 805 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 ZNF804AQ7Z570 1209 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 MED15Q96RN5 788 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 CCDC94Q9BW85 323 aaPredicted RBP16.98■□□□□ 0.31
TRMT1-201ENST00000221504 IL17RBQ9NRM6 502 aa16.98■□□□□ 0.31
TRMT1-201ENST00000221504 VWA3AA6NCI4 1184 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 AFMP43652 599 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
TRMT1-201ENST00000221504 PDCL2Q8N4E4 241 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 PNMA1Q8ND90 353 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 ANKS1AQ92625 1134 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 DYNLL2Q96FJ2 89 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 ARID3AQ99856 593 aa16.97■□□□□ 0.31
TRMT1-201ENST00000221504 BAG3O95817 575 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
TRMT1-201ENST00000221504 CALML3P27482 149 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 PPP4CP60510 307 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 DIXDC1Q155Q3 683 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 C15orf52Q6ZUT6 534 aaKnown RBP16.96■□□□□ 0.31
TRMT1-201ENST00000221504 CCP110O43303 1012 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 DPYDQ12882 1025 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 TBX2Q13207 712 aaPredicted RBP16.96■□□□□ 0.31
TRMT1-201ENST00000221504 GRIK5Q16478 980 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 PTPN21Q16825 1174 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 AMOTL1Q8IY63 956 aa16.96■□□□□ 0.31
TRMT1-201ENST00000221504 ADAMTS3O15072 1205 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 CCDC178Q5BJE1 867 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 GSDMAQ96QA5 445 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 SH3GLB2Q9NR46 395 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
TRMT1-201ENST00000221504 CASP1P29466 404 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 GRM4Q14833 912 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 GPR101Q96P66 508 aaPredicted RBP16.95■□□□□ 0.3
TRMT1-201ENST00000221504 ZMYND15Q9H091 742 aa16.95■□□□□ 0.3
TRMT1-201ENST00000221504 TUBB4AP04350 444 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 LDHCP07864 332 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 MCM7P33993 719 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 GNAQP50148 359 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 CUL4BQ13620 913 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 E2F4Q16254 413 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 SPECC1LQ69YQ0 1117 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 BLIDQ8IZY5 108 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 STAG2Q8N3U4 1231 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 TCP11L1Q9NUJ3 509 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 USP17L3A6NCW0 530 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 USP17L4A6NCW7 530 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 TSPY3P0CV98 308 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 TSPY8P0CW00 308 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
TRMT1-201ENST00000221504 USP17L1Q7RTZ2 530 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 FCHSD1Q86WN1 690 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 TMEM139Q8IV31 216 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 IQUBQ8NA54 791 aa16.94■□□□□ 0.3
TRMT1-201ENST00000221504 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
TRMT1-201ENST00000221504 GPKOWQ92917 476 aaPredicted RBP eCLIP16.94■□□□□ 0.3
TRMT1-201ENST00000221504 PYM1Q9BRP8 204 aaKnown RBP16.94■□□□□ 0.3
TRMT1-201ENST00000221504 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms