RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
PAF1-201ENST00000221265 ASTN2O75129 1339 aaPredicted RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 STK36Q9NRP7 1315 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 IGKV6D-41A0A0C4DH26 115 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 CALM1P0DP23 149 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 CALM2P0DP24 149 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 CALM3P0DP25 149 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 LMNB1P20700 586 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 KRT85P78386 507 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 TMTC3Q6ZXV5 915 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 STAG2Q8N3U4 1231 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 SRBD1Q8N5C6 995 aaKnown RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 TMEM39BQ9GZU3 492 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 MTMR4Q9NYA4 1195 aa17.54■□□□□ 0.4
PAF1-201ENST00000221265 MPHOSPH10O00566 681 aaKnown RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 RPS12P25398 132 aaKnown RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 CTCFLQ8NI51 663 aaPredicted RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 CNOT7Q9UIV1 285 aaKnown RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
PAF1-201ENST00000221265 NOVP48745 357 aa17.53■□□□□ 0.4
PAF1-201ENST00000221265 RRP1BQ14684 758 aaKnown RBP17.53■□□□□ 0.4
PAF1-201ENST00000221265 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
PAF1-201ENST00000221265 TBC1D10BQ4KMP7 808 aaPredicted RBP17.53■□□□□ 0.4
PAF1-201ENST00000221265 FAM151AQ8WW52 585 aa17.53■□□□□ 0.4
PAF1-201ENST00000221265 RBM28Q9NW13 759 aaKnown RBP17.53■□□□□ 0.4
PAF1-201ENST00000221265 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.53■□□□□ 0.4
PAF1-201ENST00000221265 COL2A1P02458 1487 aaPredicted RBP17.53■□□□□ 0.4
PAF1-201ENST00000221265 JAG1P78504 1218 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 UVSSAQ2YD98 709 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 METTL16Q86W50 562 aaKnown RBP17.52■□□□□ 0.4
PAF1-201ENST00000221265 FOXP4Q8IVH2 680 aaPredicted RBP17.52■□□□□ 0.4
PAF1-201ENST00000221265 TRIM22Q8IYM9 498 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 FUCA2Q9BTY2 467 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 TFIP11Q9UBB9 837 aaKnown RBP17.52■□□□□ 0.4
PAF1-201ENST00000221265 MAD2L2Q9UI95 211 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 ELP1O95163 1332 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 CNTNAP5Q8WYK1 1306 aa17.52■□□□□ 0.4
PAF1-201ENST00000221265 KIF28PB7ZC32 967 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 GDF11O95390 407 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 SLC35G1Q2M3R5 365 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 KRT40Q6A162 431 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 LRRC47Q8N1G4 583 aaKnown RBP17.52■□□□□ 0.39
PAF1-201ENST00000221265 DPF2Q92785 391 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 SHISA4Q96DD7 197 aa17.52■□□□□ 0.39
PAF1-201ENST00000221265 V9GY48 417 aaPredicted RBP17.52■□□□□ 0.39
PAF1-201ENST00000221265 MYO1BO43795 1136 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 GOLGA8HP0CJ92 632 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 TOP1P11387 765 aaKnown RBP17.51■□□□□ 0.39
PAF1-201ENST00000221265 MSNP26038 577 aaKnown RBP17.51■□□□□ 0.39
PAF1-201ENST00000221265 GRM4Q14833 912 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 PKN1Q16512 942 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 CERKLQ49MI3 558 aaPredicted RBP17.51■□□□□ 0.39
PAF1-201ENST00000221265 PIBF1Q8WXW3 757 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 TRIM34Q9BYJ4 488 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 DEXIO95424 95 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
PAF1-201ENST00000221265 FKBP1CQ5VVH2 108 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
PAF1-201ENST00000221265 CPVLQ9H3G5 476 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 CLIP2Q9UDT6 1046 aa17.51■□□□□ 0.39
PAF1-201ENST00000221265 USP17L2Q6R6M4 530 aa17.5■□□□□ 0.39
PAF1-201ENST00000221265 FTOQ9C0B1 505 aaKnown RBP eCLIP17.5■□□□□ 0.39
PAF1-201ENST00000221265 ZSCAN16Q9H4T2 348 aaPredicted RBP17.5■□□□□ 0.39
PAF1-201ENST00000221265 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
PAF1-201ENST00000221265 KCNJ14Q9UNX9 436 aa17.5■□□□□ 0.39
PAF1-201ENST00000221265 KIF5BP33176 963 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 ATP2B2Q01814 1243 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 CCDC17Q96LX7 622 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 NAP1L5Q96NT1 182 aaPredicted RBP17.49■□□□□ 0.39
PAF1-201ENST00000221265 SCAND2PQ9GZW5 306 aaPredicted RBP17.49■□□□□ 0.39
PAF1-201ENST00000221265 CCDC39Q9UFE4 941 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 POLR2AP24928 1970 aaKnown RBP17.49■□□□□ 0.39
PAF1-201ENST00000221265 USP17L5A8MUK1 530 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 PRPF3O43395 683 aaKnown RBP17.49■□□□□ 0.39
PAF1-201ENST00000221265 TTLL1O95922 423 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 LIG1P18858 919 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 KIF23Q02241 960 aaPredicted RBP17.49■□□□□ 0.39
PAF1-201ENST00000221265 SEPT2Q15019 361 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 MIGA2Q7L4E1 593 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 FAM83AQ86UY5 434 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 MAP3K14Q99558 947 aa17.49■□□□□ 0.39
PAF1-201ENST00000221265 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.49■□□□□ 0.39
PAF1-201ENST00000221265 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
PAF1-201ENST00000221265 CYTH3O43739 400 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 RASA3Q14644 834 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 KIF4BQ2VIQ3 1234 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 LEO1Q8WVC0 666 aaPredicted RBP17.48■□□□□ 0.39
PAF1-201ENST00000221265 SPATA32Q96LK8 384 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 RNF181Q9P0P0 153 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 AKAP17AQ02040 695 aaKnown RBP17.48■□□□□ 0.39
PAF1-201ENST00000221265 CEBPZQ03701 1054 aaKnown RBP17.48■□□□□ 0.39
PAF1-201ENST00000221265 SIAH1Q8IUQ4 282 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 TRPM4Q8TD43 1214 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 WASF1Q92558 559 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 VPS54Q9P1Q0 977 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 ZKSCAN5Q9Y2L8 839 aa17.48■□□□□ 0.39
PAF1-201ENST00000221265 GH2P01242 217 aa17.47■□□□□ 0.39
PAF1-201ENST00000221265 PDHBP11177 359 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms