RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 SLC8A3P57103 927 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 TLDC1Q6P9B6 456 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 SPDL1Q96EA4 605 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 DOCK2Q92608 1830 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 LAMB2P55268 1798 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 PPFIA3O75145 1194 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 WDHD1O75717 1129 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-201ENST00000220429 IDH1O75874 414 aaKnown RBP15.35■□□□□ 0.05
GABPB1-201ENST00000220429 FOSBP53539 338 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 CDCA2Q69YH5 1023 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-201ENST00000220429 RCSD1Q6JBY9 416 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 KIAA1328Q86T90 577 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 FCHSD1Q86WN1 690 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 IGSF22Q8N9C0 903 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 KAT14Q9H8E8 782 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
GABPB1-201ENST00000220429 UQCRFS1P1P0C7P4 283 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 AARSP49588 968 aaKnown RBP eCLIP15.34■□□□□ 0.05
GABPB1-201ENST00000220429 RAB27AP51159 221 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 ANTXR2P58335 489 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 UBE3CQ15386 1083 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-201ENST00000220429 CEP57L1Q8IYX8 460 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 KIFC2Q96AC6 838 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-201ENST00000220429 ZNF532Q9HCE3 1301 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 ZNF213O14771 459 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 PRC1O43663 620 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 NFXL1Q6ZNB6 911 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 PGBD1Q96JS3 809 aa15.34■□□□□ 0.05
GABPB1-201ENST00000220429 TMX4Q9H1E5 349 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-201ENST00000220429 SUDS3Q9H7L9 328 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-201ENST00000220429 TCRBV5S4A2TA0A5A2 114 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 MAFGO15525 162 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 KCNQ2O43526 872 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 PPFIA2O75334 1257 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 NTSR2O95665 410 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 FAM163BP0C2L3 166 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 PDE6AP16499 860 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 SMTNP53814 917 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 PARP10Q53GL7 1025 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 BARGINQ6ZT62 677 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 C3orf20Q8ND61 904 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 SPDYE1Q8NFV5 336 aaPredicted RBP15.33■□□□□ 0.05
GABPB1-201ENST00000220429 NCOA7Q8NI08 942 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.33■□□□□ 0.05
GABPB1-201ENST00000220429 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.05
GABPB1-201ENST00000220429 GOLGA6L9A6NEM1 432 aa15.33■□□□□ 0.04
GABPB1-201ENST00000220429 ADD1P35611 737 aaKnown RBP15.33■□□□□ 0.04
GABPB1-201ENST00000220429 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
GABPB1-201ENST00000220429 CCDC96Q2M329 555 aa15.33■□□□□ 0.04
GABPB1-201ENST00000220429 VIPAS39Q9H9C1 493 aa15.33■□□□□ 0.04
GABPB1-201ENST00000220429 ATP6V0A4Q9HBG4 840 aa15.33■□□□□ 0.04
GABPB1-201ENST00000220429 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.04
GABPB1-201ENST00000220429 CARMIL3Q8ND23 1372 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 CUTAO60888 179 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 SLC5A1P13866 664 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
GABPB1-201ENST00000220429 VSNL1P62760 191 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 B4GALNT4Q76KP1 1039 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 CRACR2AQ9BSW2 395 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 CENPHQ9H3R5 247 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 HOMER3Q9NSC5 361 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 CHCHD3Q9NX63 227 aaKnown RBP15.32■□□□□ 0.04
GABPB1-201ENST00000220429 DENND2AQ9ULE3 1009 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 BCORQ6W2J9 1755 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 MEFVO15553 781 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-201ENST00000220429 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
GABPB1-201ENST00000220429 ARHGAP25P42331 645 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 TUBB4BP68371 445 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 MAB21L3Q8N8X9 362 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 CHD4Q14839 1912 aa15.32■□□□□ 0.04
GABPB1-201ENST00000220429 COL4A1P02462 1669 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 A0A087WWV3 80 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 ENO4A6NNW6 628 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 RASSF9O75901 435 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 RASGRF1Q13972 1273 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 RALYLQ86SE5 291 aaKnown RBP15.31■□□□□ 0.04
GABPB1-201ENST00000220429 SPATA5Q8NB90 893 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 NKX2-3Q8TAU0 364 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 PUF60Q9UHX1 559 aaKnown RBP15.31■□□□□ 0.04
GABPB1-201ENST00000220429 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 MYO6Q9UM54 1294 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 HPS5Q9UPZ3 1129 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 SAMM50Q9Y512 469 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 KLF18A0A0U1RQI7 1052 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 CDR1P51861 262 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 KCNB1Q14721 858 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 KIF4BQ2VIQ3 1234 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 CCDC152Q4G0S7 254 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 TBC1D10CQ8IV04 446 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 FAM76AQ8TAV0 307 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 LMBR1Q8WVP7 490 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 CASZ1Q86V15 1759 aa15.31■□□□□ 0.04
GABPB1-201ENST00000220429 GUCY1B3Q02153 619 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 SNCBQ16143 134 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 CCDC40Q4G0X9 1142 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 RABEP2Q9H5N1 569 aa15.3■□□□□ 0.04
GABPB1-201ENST00000220429 CFAP45Q9UL16 551 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms