RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 SCRN1Q12765 414 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 CDC37L1Q7L3B6 337 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 BIN2Q9UBW5 565 aaPredicted RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 BACH1O14867 736 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
CCDC113-201ENST00000219299 MCM3P25205 808 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 FAM193AP78312 1265 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 ARHGAP29Q52LW3 1261 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 TBC1D10CQ8IV04 446 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 BEGAINQ9BUH8 593 aa10.64□□□□□ -0.71
CCDC113-201ENST00000219299 NONOQ15233 471 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 KIF4BQ2VIQ3 1234 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 TICAM2Q86XR7 235 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 SUGT1Q9Y2Z0 365 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 PAXBP1Q9Y5B6 917 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 ASNSP08243 561 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 KRT26Q7Z3Y9 468 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 GLT8D2Q9H1C3 349 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 PCDHA1Q9Y5I3 950 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 GPATCH4Q5T3I0 446 aaKnown RBP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 ARMC9Q7Z3E5 817 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 WRNIP1Q96S55 665 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 SLIT2O94813 1529 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 ZMYM6O95789 1325 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 CCNT1O60563 726 aaKnown RBP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 URI1O94763 535 aaPredicted RBP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 TXKP42681 527 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 CTR9Q6PD62 1173 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 TMED8Q6PL24 325 aaPredicted RBP10.63□□□□□ -0.71
CCDC113-201ENST00000219299 DNAI2Q9GZS0 605 aa10.63□□□□□ -0.71
CCDC113-201ENST00000219299 PNPLA7Q6ZV29 1317 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 DDAH1O94760 285 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 ADCY5O95622 1261 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 GMPSP49915 693 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 FBXO11Q86XK2 927 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 KRT222Q8N1A0 295 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 C16orf45Q96MC5 204 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 RPAP1Q9BWH6 1393 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 WTIPA6NIX2 430 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 SPDYE4A6NLX3 237 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 BTBD18B2RXH4 712 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 RGL2O15211 777 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 CHMP2AO43633 222 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 SCG2P13521 617 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 IREB2P48200 963 aaKnown RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 RASA3Q14644 834 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 RRAGBQ5VZM2 374 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 ANO1Q5XXA6 986 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 KRI1Q8N9T8 703 aaKnown RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 PYM1Q9BRP8 204 aaKnown RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 POTEB2H3BUK9 544 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 POLR3GO15318 223 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 SEPT2Q15019 361 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 HS1BP3Q53T59 392 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 KANK3Q6NY19 840 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 SLC10A4Q96EP9 437 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 PSTPIP2Q9H939 334 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 BMP3P12645 472 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 GSDMDP57764 484 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 TTC38Q5R3I4 469 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 ZNF512BQ96KM6 892 aaPredicted RBP10.62□□□□□ -0.71
CCDC113-201ENST00000219299 ZNF341Q9BYN7 854 aa10.62□□□□□ -0.71
CCDC113-201ENST00000219299 A0A1B0GVL5 298 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 NMT2O60551 498 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 TBCAO75347 108 aaKnown RBP10.61□□□□□ -0.71
CCDC113-201ENST00000219299 CASQ1P31415 396 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 PRAMEF18Q5VWM3 479 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 TMEM179Q6ZVK1 233 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 KRT25Q7Z3Z0 450 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 ABT1Q9ULW3 272 aaKnown RBP10.61□□□□□ -0.71
CCDC113-201ENST00000219299 IQCA1LA6NCM1 817 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 SH2B2O14492 632 aaPredicted RBP10.61□□□□□ -0.71
CCDC113-201ENST00000219299 TM4SF1P30408 202 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 TRERF1Q96PN7 1200 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 TRIM21P19474 475 aaKnown RBP10.61□□□□□ -0.71
CCDC113-201ENST00000219299 LIFRP42702 1097 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 DGKHQ86XP1 1220 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 STAG1Q8WVM7 1258 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 LTN1O94822 1766 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 FGFR2P21802 821 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 ASIC1P78348 528 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 PABPC4Q13310 644 aaKnown RBP eCLIP10.61□□□□□ -0.71
CCDC113-201ENST00000219299 SPECC1Q5M775 1068 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 LRSAM1Q6UWE0 723 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 ANKRD35Q8N283 1001 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 CCPG1Q9ULG6 757 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 ZHX2Q9Y6X8 837 aa10.61□□□□□ -0.71
CCDC113-201ENST00000219299 LMNB1P20700 586 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 HOXA10P31260 410 aaPredicted RBP10.6□□□□□ -0.71
CCDC113-201ENST00000219299 ZSCAN23Q3MJ62 389 aa10.6□□□□□ -0.71
CCDC113-201ENST00000219299 MICALCLQ6ZW33 695 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms