RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 GOLGA1Q92805 767 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 TMOD2Q9NZR1 351 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 CYP2D6P10635 497 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 TCERG1LQ5VWI1 586 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 ENAHQ8N8S7 591 aaPredicted RBP13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 EYA3Q99504 573 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 PPP2R2CQ9Y2T4 447 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 KLRF2D3W0D1 207 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 NMT2O60551 498 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 RHOXF2BP0C7M4 288 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 LEKR1Q6ZMV7 388 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 GPIHBP1Q8IV16 184 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 ENGASEQ8NFI3 743 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 DYNLL2Q96FJ2 89 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 RHOXF2Q9BQY4 288 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 NONOQ15233 471 aaKnown RBP eCLIP13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 SPATA1Q5VX52 437 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 COL15A1P39059 1388 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 MYO1BO43795 1136 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 IQCEQ6IPM2 695 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 CRACR2AQ9BSW2 395 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 SLFN14P0C7P3 912 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.181e-13■■■■■ 55.2
TM9SF4-201ENST00000217315 USP21Q9UK80 565 aa13.91□□□□□ -0.18
TM9SF4-201ENST00000217315 PCP11498 1178 aaKnown RBP13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 GTF2IP78347 998 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 CLEC4GQ6UXB4 293 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 CCDC42Q96M95 316 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 SLF1Q9BQI6 1058 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 SMCO2A6NFE2 343 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 LRP10Q7Z4F1 713 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 TXLNBQ8N3L3 684 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 AGXT2Q9BYV1 514 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 SEPT11Q9NVA2 429 aaKnown RBP13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 BICDL2A1A5D9 508 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 CAPZA3Q96KX2 299 aa13.9□□□□□ -0.18
TM9SF4-201ENST00000217315 SEMA3EO15041 775 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 NFAT5O94916 1531 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 CCDC122Q5T0U0 273 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 RBM17Q96I25 401 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 GSDMAQ96QA5 445 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 CACNA1FO60840 1977 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 STK36Q9NRP7 1315 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 ARID5AQ03989 594 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 SV2BQ7L1I2 683 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 CABP7Q86V35 215 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 CEP112Q8N8E3 955 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 PAFAH1B1P43034 410 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 TBC1D9BQ66K14 1250 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 ENOX1Q8TC92 643 aaKnown RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
TM9SF4-201ENST00000217315 USP17L3A6NCW0 530 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 USP17L4A6NCW7 530 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KRT86O43790 486 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 ERCC5P28715 1186 aaPredicted RBP13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 BTDP43251 543 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KIF5AQ12840 1032 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 FAM196AQ6ZSG2 479 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 USP17L1Q7RTZ2 530 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KRT25Q7Z3Z0 450 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 REXO1Q8N1G1 1221 aaKnown RBP13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 PPP1R1BQ9UD71 204 aaPredicted RBP13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 FAM205CA6NFA0 338 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KIF20AO95235 890 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 PRR29P0C7W0 189 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 MORC3Q14149 939 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KRT83P78385 493 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 ITPK1Q13572 414 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 METTL16Q86W50 562 aaKnown RBP13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 TMTC1Q8IUR5 882 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 CUL5Q93034 780 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 BRIP1Q9BX63 1249 aa13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 CWC15Q9P013 229 aaKnown RBP13.88□□□□□ -0.19
TM9SF4-201ENST00000217315 KCNJ18B7U540 433 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 STX10O60499 249 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TECP42680 631 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 KCNJ12Q14500 433 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 CYP26C1Q6V0L0 522 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 USP49Q70CQ1 688 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 SMAP1Q8IYB5 467 aaPredicted RBP13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 EHBP1Q8NDI1 1231 aa13.87□□□□□ -0.19
TM9SF4-201ENST00000217315 TAF4BQ92750 862 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms