RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 FAM43AQ8N2R8 423 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 PALM3A6NDB9 673 aaPredicted RBP19.99■□□□□ 0.79
VRK1-201ENST00000216639 ZNF202O95125 648 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 BMP15O95972 392 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 NOVP48745 357 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 STX1AQ16623 288 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 ANO6Q4KMQ2 910 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 HS1BP3Q53T59 392 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 PPP4R3BQ5MIZ7 849 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 FAM177A1Q8N128 213 aaPredicted RBP19.99■□□□□ 0.79
VRK1-201ENST00000216639 CEP95Q96GE4 821 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 TIGD1Q96MW7 591 aa19.99■□□□□ 0.79
VRK1-201ENST00000216639 DHX36Q9H2U1 1008 aaKnown RBP19.99■□□□□ 0.79
VRK1-201ENST00000216639 PARP1P09874 1014 aaKnown RBP19.98■□□□□ 0.79
VRK1-201ENST00000216639 STAG2Q8N3U4 1231 aa19.98■□□□□ 0.79
VRK1-201ENST00000216639 PDGFDQ9GZP0 370 aaPredicted RBP19.98■□□□□ 0.79
VRK1-201ENST00000216639 EHD4Q9H223 541 aa19.98■□□□□ 0.79
VRK1-201ENST00000216639 MORC2Q9Y6X9 1032 aaPredicted RBP19.98■□□□□ 0.79
VRK1-201ENST00000216639 FAM237AA0A1B0GTK4 181 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 TRIM75PA6NK02 468 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 SYKP43405 635 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 ZRSR1Q15695 479 aaKnown RBP19.97■□□□□ 0.79
VRK1-201ENST00000216639 RESP18Q5W5W9 173 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 CCDC148Q8NFR7 591 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 SHISA4Q96DD7 197 aa19.97■□□□□ 0.79
VRK1-201ENST00000216639 NPM3O75607 178 aaKnown RBP19.96■□□□□ 0.79
VRK1-201ENST00000216639 SMARCA1P28370 1054 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 PIBF1Q8WXW3 757 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 PSMD1Q99460 953 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 SPZ1Q9BXG8 430 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 IDI2Q9BXS1 227 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 FAM13BQ9NYF5 915 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 MTMR7Q9Y216 660 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 HPSEQ9Y251 543 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 PCDHB6Q9Y5E3 794 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 ADAMTSL1Q8N6G6 1762 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 KLRF2D3W0D1 207 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 PTPREP23469 700 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 SOGA3Q5TF21 947 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 GALNT17Q6IS24 598 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 SHC4Q6S5L8 630 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 ANO10Q9NW15 660 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 MTMR4Q9NYA4 1195 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
VRK1-201ENST00000216639 SCN9AQ15858 1988 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 ATP2B1P20020 1258 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 TRAPPC10P48553 1259 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 ZNF165P49910 485 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 ZNF579Q8NAF0 562 aaKnown RBP19.95■□□□□ 0.78
VRK1-201ENST00000216639 TNFRSF25Q93038 417 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 CCDC17Q96LX7 622 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 VPS33BQ9H267 617 aa19.95■□□□□ 0.78
VRK1-201ENST00000216639 AKR1B1P15121 316 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 NFIAQ12857 509 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 NPY5RQ15761 445 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 CCDC12Q8WUD4 166 aaPredicted RBP19.94■□□□□ 0.78
VRK1-201ENST00000216639 CLIC6Q96NY7 704 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 TRIM34Q9BYJ4 488 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 CBX8Q9HC52 389 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 FBXO2Q9UK22 296 aaPredicted RBP19.94■□□□□ 0.78
VRK1-201ENST00000216639 SRPRBQ9Y5M8 271 aaKnown RBP19.94■□□□□ 0.78
VRK1-201ENST00000216639 MYH8P13535 1937 aa19.94■□□□□ 0.78
VRK1-201ENST00000216639 ZNF646O15015 1829 aaPredicted RBP19.94■□□□□ 0.78
VRK1-201ENST00000216639 IGKV6D-41A0A0C4DH26 115 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 TTLL1O95922 423 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 DPEP1P16444 411 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 SHMT1P34896 483 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 BLIDQ8IZY5 108 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 NAT10Q9H0A0 1025 aaKnown RBP19.93■□□□□ 0.78
VRK1-201ENST00000216639 DNAJC25Q9H1X3 360 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 KIAA1468Q9P260 1216 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 PI4KBQ9UBF8 816 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 CCDC39Q9UFE4 941 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 PCDHA4Q9UN74 947 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 ADCY5O95622 1261 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 GOLGA8HP0CJ92 632 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 ASPRV1Q53RT3 343 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 TTC38Q5R3I4 469 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 RRP36Q96EU6 259 aaKnown RBP19.93■□□□□ 0.78
VRK1-201ENST00000216639 SEC63Q9UGP8 760 aaKnown RBP19.93■□□□□ 0.78
VRK1-201ENST00000216639 KCNH3Q9ULD8 1083 aa19.93■□□□□ 0.78
VRK1-201ENST00000216639 CYTH3O43739 400 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 PLCB2Q00722 1185 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 HEATR3Q7Z4Q2 680 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 LUZP1Q86V48 1076 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 ZSCAN29Q8IWY8 852 aaPredicted RBP19.92■□□□□ 0.78
VRK1-201ENST00000216639 LARGE2Q8N3Y3 721 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 GPKOWQ92917 476 aaPredicted RBP eCLIP19.92■□□□□ 0.78
VRK1-201ENST00000216639 FERMT2Q96AC1 680 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 BARHL2Q9NY43 387 aa19.92■□□□□ 0.78
VRK1-201ENST00000216639 HOOK1Q9UJC3 728 aaKnown RBP19.92■□□□□ 0.78
VRK1-201ENST00000216639 YDJCA8MPS7 323 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 ESPNB1AK53 854 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
VRK1-201ENST00000216639 CFAP100Q494V2 611 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
VRK1-201ENST00000216639 USP17L2Q6R6M4 530 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 PIK3AP1Q6ZUJ8 805 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 CEP57L1Q8IYX8 460 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms