RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 MAP2K5Q13163 448 aa18.07■□□□□ 0.48
UPK3A-201ENST00000216211 UBE3CQ15386 1083 aa18.07■□□□□ 0.48
UPK3A-201ENST00000216211 TMEM179Q6ZVK1 233 aa18.07■□□□□ 0.48
UPK3A-201ENST00000216211 CLEC10AQ8IUN9 316 aa18.07■□□□□ 0.48
UPK3A-201ENST00000216211 ZNFX1Q9P2E3 1918 aaKnown RBP18.07■□□□□ 0.48
UPK3A-201ENST00000216211 GLRX3O76003 335 aaKnown RBP18.06■□□□□ 0.48
UPK3A-201ENST00000216211 PTPREP23469 700 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 CCND3P30281 292 aaPredicted RBP18.06■□□□□ 0.48
UPK3A-201ENST00000216211 KIAA1755Q5JYT7 1200 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 TANGO6Q9C0B7 1094 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 NBPF3Q9H094 633 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 PUS7LQ9H0K6 701 aaKnown RBP18.06■□□□□ 0.48
UPK3A-201ENST00000216211 OGDHLQ9ULD0 1010 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 SLC4A4Q9Y6R1 1079 aa18.06■□□□□ 0.48
UPK3A-201ENST00000216211 ZNF236Q9UL36 1845 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 SLC15A5A6NIM6 579 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 USP17L12C9JPN9 530 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 USP17L21D6R901 530 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 CDK8P49336 464 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 COG2Q14746 738 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 C12orf60Q5U649 245 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 ZSCAN25Q6NSZ9 544 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 PRO3102Q9H379 93 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 FLRT1Q9NZU1 646 aa18.05■□□□□ 0.48
UPK3A-201ENST00000216211 GREB1LQ9C091 1923 aaPredicted RBP18.04■□□□□ 0.48
UPK3A-201ENST00000216211 ICA1Q05084 483 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 C16orf86Q6ZW13 317 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 SIAH1Q8IUQ4 282 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 AMOTL1Q8IY63 956 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 C7orf61Q8IZ16 206 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 DDRGK1Q96HY6 314 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 C11orf49Q9H6J7 331 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 ARHGEF10LQ9HCE6 1279 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 ECHDC1Q9NTX5 307 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 IVNS1ABPQ9Y6Y0 642 aa18.04■□□□□ 0.48
UPK3A-201ENST00000216211 GRB14Q14449 540 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 LHX8Q68G74 356 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 CTR9Q6PD62 1173 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 SPICE1Q8N0Z3 855 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 NPLOC4Q8TAT6 608 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 CCDC17Q96LX7 622 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 DCTPP1Q9H773 170 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 HOXC10Q9NYD6 342 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 TMX2Q9Y320 296 aa18.03■□□□□ 0.48
UPK3A-201ENST00000216211 MYH4Q9Y623 1939 aa18.02■□□□□ 0.48
UPK3A-201ENST00000216211 TSHZ3Q63HK5 1081 aa18.02■□□□□ 0.48
UPK3A-201ENST00000216211 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
UPK3A-201ENST00000216211 VCPKMTQ9H867 229 aa18.02■□□□□ 0.48
UPK3A-201ENST00000216211 STAP2Q9UGK3 403 aa18.02■□□□□ 0.48
UPK3A-201ENST00000216211 PFASO15067 1338 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 PLXNA1Q9UIW2 1896 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 FLOT1O75955 427 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 DSG3P32926 999 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 ATP2B2Q01814 1243 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 MFSD14CQ5VZR4 134 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
UPK3A-201ENST00000216211 LPAR1Q92633 364 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 SPATC1LQ9H0A9 340 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 SH2D4AQ9H788 454 aa18.01■□□□□ 0.47
UPK3A-201ENST00000216211 ZMYND8Q9ULU4 1186 aaPredicted RBP18.01■□□□□ 0.47
UPK3A-201ENST00000216211 HOXC6P09630 235 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 EEF2P13639 858 aaKnown RBP18■□□□□ 0.47
UPK3A-201ENST00000216211 PLS1Q14651 629 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 KBTBD3Q8NAB2 608 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 ATG4CQ96DT6 458 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 GPATCH3Q96I76 525 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 STRBPQ96SI9 672 aaKnown RBP18■□□□□ 0.47
UPK3A-201ENST00000216211 ARPP21Q9UBL0 812 aaPredicted RBP18■□□□□ 0.47
UPK3A-201ENST00000216211 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
UPK3A-201ENST00000216211 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
UPK3A-201ENST00000216211 COL6A1P12109 1028 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 SYN1P17600 705 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 ERCC3P19447 782 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 ADORA2AP29274 412 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 CNGA1P29973 690 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 CYP2C19P33261 490 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 DPP9Q86TI2 863 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 STK11IPQ8N1F8 1099 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 MB21D1Q8N884 522 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 SHCBP1Q8NEM2 672 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
UPK3A-201ENST00000216211 GSG1L2A8MUP6 293 aa17.98■□□□□ 0.47
UPK3A-201ENST00000216211 RNF113AO15541 343 aaKnown RBP17.98■□□□□ 0.47
UPK3A-201ENST00000216211 NCAPG2Q86XI2 1143 aa17.98■□□□□ 0.47
UPK3A-201ENST00000216211 TRPV1Q8NER1 839 aa17.98■□□□□ 0.47
UPK3A-201ENST00000216211 APPBP2Q92624 585 aa17.98■□□□□ 0.47
UPK3A-201ENST00000216211 KANSL2Q9H9L4 492 aa17.98■□□□□ 0.47
UPK3A-201ENST00000216211 STRNO43815 780 aa17.97■□□□□ 0.47
UPK3A-201ENST00000216211 RAD21O60216 631 aa17.97■□□□□ 0.47
UPK3A-201ENST00000216211 SBK1Q52WX2 424 aa17.97■□□□□ 0.47
UPK3A-201ENST00000216211 DDX20Q9UHI6 824 aaKnown RBP17.97■□□□□ 0.47
UPK3A-201ENST00000216211 PCDHB15Q9Y5E8 787 aa17.97■□□□□ 0.47
UPK3A-201ENST00000216211 A0A1W2PPC1 479 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 MINDY4BA8MYZ0 360 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 M0R2C6 588 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 COBLO75128 1261 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 IGHA2P01877 340 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 TMEM132BQ14DG7 1078 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 LRRC26Q2I0M4 334 aa17.96■□□□□ 0.47
UPK3A-201ENST00000216211 GDF15Q99988 308 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms