RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TUT1Q9H6E5 874 aaKnown RBP12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 MKRN1Q9UHC7 482 aaKnown RBP12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 ST5P78524 1137 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 MECOMQ03112 1051 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 WTAPQ15007 396 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 PPP2R5BQ15173 497 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 USP28Q96RU2 1077 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 SENP2Q9HC62 589 aa12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 TTF2Q9UNY4 1162 aaKnown RBP12.23□□□□□ -0.45
APOBEC3D-201ENST00000216099 ERICH2A1L162 156 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 YEATS4O95619 227 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 CCDC192P0DO97 292 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 IFNAR1P17181 557 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 CDC27P30260 824 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 MMP14P50281 582 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 GYS2P54840 703 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 WDR66Q8TBY9 1149 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 BICD2Q8TD16 824 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 WASF1Q92558 559 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 ESR2Q92731 530 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 CRNKL1Q9BZJ0 848 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 INCENPQ9NQS7 918 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 DDX56Q9NY93 547 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 DACT1Q9NYF0 836 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 TFCP2L1Q9NZI6 479 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 FMNL1O95466 1100 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 MAPK1P28482 360 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 DYNLL1P63167 89 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 GUCY1B3Q02153 619 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZNF746Q6NUN9 644 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 TDRD7Q8NHU6 1098 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 SDR42E1Q8WUS8 393 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 RPGRQ92834 1020 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 ALG1Q9BT22 464 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 NPDC1Q9NQX5 325 aaPredicted RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 ATP8A2Q9NTI2 1148 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 QSER1Q2KHR3 1735 aa12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 TNS1Q9HBL0 1735 aaKnown RBP12.22□□□□□ -0.45
APOBEC3D-201ENST00000216099 CCDC196A0A1B0GTZ2 297 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 SCAMP3O14828 347 aaKnown RBP12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 IARSP41252 1262 aaKnown RBP12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 SEC23AQ15436 765 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 SBK1Q52WX2 424 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 MICU3Q86XE3 530 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 RBM17Q96I25 401 aaKnown RBP12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 MYH1P12882 1939 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 A0A1W2PQ27 194 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 A0A1W2PQ64 194 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 A0A1W2PQD8 194 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 VGLL3A8MV65 326 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 CTAGE5O15320 804 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 ORC4O43929 436 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 SERPINB2P05120 415 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZNF804AQ7Z570 1209 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 RAB11FIP4Q86YS3 637 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 RNF214Q8ND24 703 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
APOBEC3D-201ENST00000216099 KLRG2A4D1S0 409 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 S100BP04271 92 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 ATP2B4P23634 1241 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 RTN1Q16799 776 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 RRP12Q5JTH9 1297 aaKnown RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 CRAMP1Q96RY5 1269 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 UBAC1Q9BSL1 405 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 PCDHGB7Q9Y5F8 929 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 COL11A2P13942 1736 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 MINDY4BA8MYZ0 360 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 NR1I2O75469 434 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 GSTO1P78417 241 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
APOBEC3D-201ENST00000216099 BBOX1O75936 387 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 AMPD3Q01432 767 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 CHAF1AQ13111 956 aaPredicted RBP12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 KRT40Q6A162 431 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 CCDC73Q6ZRK6 1079 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 CCAR1Q8IX12 1150 aaKnown RBP12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 TOMM22Q9NS69 142 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 CAVIN2O95810 425 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 SLC3A2P08195 630 aaKnown RBP12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 U2AF2P26368 475 aaKnown RBP eCLIP12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 PRDX5P30044 214 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 FAM160A1Q05DH4 1040 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 TYRO3Q06418 890 aa12.19□□□□□ -0.46
APOBEC3D-201ENST00000216099 TRIM29Q14134 588 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms