RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 SPEF2Q9C093 1822 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 PRDX5P30044 214 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 GRIN1Q05586 938 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 NFIXQ14938 502 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 ZNF654Q8IZM8 581 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 OXER1Q8TDS5 423 aa16.92■□□□□ 0.3
SRRD-201ENST00000215917 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
SRRD-201ENST00000215917 CAVIN2O95810 425 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.91■□□□□ 0.3
SRRD-201ENST00000215917 PDE11AQ9HCR9 933 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 TNKSO95271 1327 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 A0A1W2PQ27 194 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 A0A1W2PQ64 194 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 A0A1W2PQD8 194 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 HGSO14964 777 aaPredicted RBP16.91■□□□□ 0.3
SRRD-201ENST00000215917 MYO1BO43795 1136 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 SHC4Q6S5L8 630 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 CMA1P23946 247 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
SRRD-201ENST00000215917 MRPS25P82663 173 aaKnown RBP16.91■□□□□ 0.3
SRRD-201ENST00000215917 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
SRRD-201ENST00000215917 V9GY48 417 aaPredicted RBP16.91■□□□□ 0.3
SRRD-201ENST00000215917 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 USP17L12C9JPN9 530 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 USP17L21D6R901 530 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 LIG3P49916 1009 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 FAM217BQ9NTX9 383 aaPredicted RBP16.9■□□□□ 0.3
SRRD-201ENST00000215917 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
SRRD-201ENST00000215917 CNBD1Q8NA66 436 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 ESR2Q92731 530 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 VPS16Q9H269 839 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 DACH1Q9UI36 760 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 NMT2O60551 498 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
SRRD-201ENST00000215917 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
SRRD-201ENST00000215917 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
SRRD-201ENST00000215917 RNF41Q9H4P4 317 aaPredicted RBP16.9■□□□□ 0.3
SRRD-201ENST00000215917 CCDC175P0C221 793 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
SRRD-201ENST00000215917 NOSTRINQ8IVI9 506 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 FANCBQ8NB91 859 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 CEP89Q96ST8 783 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 PCDHB6Q9Y5E3 794 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 CT47A1Q5JQC4 288 aaPredicted RBP16.89■□□□□ 0.29
SRRD-201ENST00000215917 GOLGA6L10A6NI86 522 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 GBP3Q9H0R5 595 aa16.89■□□□□ 0.29
SRRD-201ENST00000215917 XBP1P17861 261 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 EPS15P42566 896 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 NTRK3Q16288 839 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 MAATS1Q7Z4T9 603 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
SRRD-201ENST00000215917 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 PCDHA5Q9Y5H7 936 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 ZNF804BA4D1E1 1349 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 SPATA31A6Q5VVP1 1343 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 RTL9Q8NET4 1388 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 PNMA6AP0CW24 399 aaPredicted RBP16.88■□□□□ 0.29
SRRD-201ENST00000215917 MECOMQ03112 1051 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 PPP1R13BQ96KQ4 1090 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 COL1A1P02452 1464 aaPredicted RBP16.88■□□□□ 0.29
SRRD-201ENST00000215917 NLRP12P59046 1061 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 MYL5Q02045 173 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 KRI1Q8N9T8 703 aaKnown RBP16.88■□□□□ 0.29
SRRD-201ENST00000215917 WASF1Q92558 559 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
SRRD-201ENST00000215917 FANCLQ9NW38 375 aa16.88■□□□□ 0.29
SRRD-201ENST00000215917 MACROD2A1Z1Q3 448 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 TDRD12Q587J7 1177 aaKnown RBP16.87■□□□□ 0.29
SRRD-201ENST00000215917 SLC10A5Q5PT55 438 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 USP49Q70CQ1 688 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CTAGE9A4FU28 777 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 GNAT2P19087 354 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CASP1P29466 404 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CCDC196A0A1B0GTZ2 297 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 PLEKHA8P1O95397 391 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CYP2D6P10635 497 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CATIPQ7Z7H3 387 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 CERKQ8TCT0 537 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 MRFAP1L1Q96HT8 127 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 BRMS1Q9HCU9 246 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
SRRD-201ENST00000215917 TRPC5Q9UL62 973 aaPredicted RBP16.87■□□□□ 0.29
SRRD-201ENST00000215917 DDX60Q8IY21 1712 aaKnown RBP16.87■□□□□ 0.29
SRRD-201ENST00000215917 ARID5AQ03989 594 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 ZNF174Q15697 407 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 AEBP2Q6ZN18 517 aaPredicted RBP16.86■□□□□ 0.29
SRRD-201ENST00000215917 POLD4Q9HCU8 107 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 LIFRP42702 1097 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 ATRNO75882 1429 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 FMNL1O95466 1100 aaPredicted RBP16.86■□□□□ 0.29
SRRD-201ENST00000215917 IFNAR1P17181 557 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 ST5P78524 1137 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 ALX1Q15699 326 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 RGS22Q8NE09 1264 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 IFT81Q8WYA0 676 aa16.86■□□□□ 0.29
SRRD-201ENST00000215917 EBAG9O00559 213 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms