RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CYP2J2P51589 502 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 CERS3Q8IU89 383 aa20.95■□□□□ 0.94
MBD3-201ENST00000156825 ZNF804BA4D1E1 1349 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 HGSO14964 777 aaPredicted RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 MRPS9P82933 396 aaKnown RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 PPP1R21Q6ZMI0 780 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 APBB1IPQ7Z5R6 666 aaPredicted RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 SECISBP2LQ93073 1101 aaKnown RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 IRX3P78415 501 aaPredicted RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 PCDHA7Q9UN72 937 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 TRIM37O94972 964 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 VWA3BQ502W6 1294 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 FAM196AQ6ZSG2 479 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 GLG1Q92896 1179 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 NSRP1Q9H0G5 558 aaKnown RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 MYO1AQ9UBC5 1043 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 KIF24Q5T7B8 1368 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 IGSF1Q8N6C5 1336 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 PRKAB2O43741 272 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 TRIM14Q14142 442 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 C6orf163Q5TEZ5 329 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 SMCR8Q8TEV9 937 aaPredicted RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 THRAP3Q9Y2W1 955 aaKnown RBP20.94■□□□□ 0.94
MBD3-201ENST00000156825 GPBP1Q86WP2 473 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 FAM169AQ9Y6X4 670 aa20.94■□□□□ 0.94
MBD3-201ENST00000156825 CERKLQ49MI3 558 aaPredicted RBP20.93■□□□□ 0.94
MBD3-201ENST00000156825 SUPT20HQ8NEM7 779 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 RASGRP4Q8TDF6 673 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 CLRN2A0PK11 232 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 PDE6BP35913 854 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 CYP4A11Q02928 519 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 RNF34Q969K3 372 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 PCDHA12Q9UN75 941 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 ERVK-7P63135 1459 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 ERO1AQ96HE7 468 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 NOX5Q96PH1 765 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 SCG2P13521 617 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 MAP4K1Q92918 833 aa20.93■□□□□ 0.94
MBD3-201ENST00000156825 NDUFA8P51970 172 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.92■□□□□ 0.94
MBD3-201ENST00000156825 ARHGAP6O43182 974 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 PPP2R5DQ14738 602 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 EXOC7Q9UPT5 735 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 ADCY9O60503 1353 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 ZMYM6O95789 1325 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 TMTC1Q8IUR5 882 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 CCDC26Q8TAB7 109 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 NLRX1Q86UT6 975 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 GPT2Q8TD30 523 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 ZFYVE16Q7Z3T8 1539 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.92■□□□□ 0.946e-7■■□□□ 14.4
MBD3-201ENST00000156825 FAM135BQ49AJ0 1406 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 MBD5Q9P267 1494 aa20.92■□□□□ 0.94
MBD3-201ENST00000156825 TNNI1P19237 187 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 ICA1Q05084 483 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 PTGDRQ13258 359 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 SREK1Q8WXA9 508 aaKnown RBP20.91■□□□□ 0.94
MBD3-201ENST00000156825 LRRC45Q96CN5 670 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 FTOQ9C0B1 505 aaKnown RBP eCLIP20.91■□□□□ 0.944e-13■■■□□ 15.5
MBD3-201ENST00000156825 H7C1D1 291 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 TIGD1Q96MW7 591 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 M0R2C6 588 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 NDC80O14777 642 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 ATP2B4P23634 1241 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 HDXQ7Z353 690 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 ERFEQ4G0M1 354 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 STMN4Q9H169 189 aaPredicted RBP20.91■□□□□ 0.94
MBD3-201ENST00000156825 ABCB4P21439 1286 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 UBXN2AP68543 259 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 DCUN1D2Q6PH85 259 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 MICALL1Q8N3F8 863 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 CARD10Q9BWT7 1032 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 SLC39A2Q9NP94 309 aa20.91■□□□□ 0.94
MBD3-201ENST00000156825 PLXNC1O60486 1568 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 EBAG9O00559 213 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 DAAM2Q86T65 1068 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 FANCLQ9NW38 375 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 PBRM1Q86U86 1689 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 TMEM232C9JQI7 657 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 ERCC5P28715 1186 aaPredicted RBP20.9■□□□□ 0.94
MBD3-201ENST00000156825 CHURC1Q8WUH1 139 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 ATP8A2Q9NTI2 1148 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 BAG6P46379 1132 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 ZNF365Q70YC5 407 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 MIER3Q7Z3K6 550 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 TRMT2AQ8IZ69 625 aaKnown RBP20.9■□□□□ 0.94
MBD3-201ENST00000156825 FAM76AQ8TAV0 307 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
MBD3-201ENST00000156825 QTRT2Q9H974 415 aaKnown RBP20.9■□□□□ 0.94
MBD3-201ENST00000156825 TBC1D10BQ4KMP7 808 aaPredicted RBP20.89■□□□□ 0.94
MBD3-201ENST00000156825 GPATCH11Q8N954 259 aa20.89■□□□□ 0.94
MBD3-201ENST00000156825 NUP58Q9BVL2 599 aa20.89■□□□□ 0.94
MBD3-201ENST00000156825 DBNDD1Q9H9R9 158 aa20.89■□□□□ 0.94
MBD3-201ENST00000156825 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 METTL13Q8N6R0 699 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 CYP2D7A0A087X1C5 515 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 ZMYM1Q5SVZ6 1142 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 FAM102BQ5T8I3 360 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms