RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CNBD1Q8NA66 436 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 CCDC150Q8NCX0 1101 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 SYMPKQ92797 1274 aaKnown RBP14.97□□□□□ -0.01
CTNS-201ENST00000046640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.97□□□□□ -0.01
CTNS-201ENST00000046640 NRDCO43847 1150 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 RC3H1Q5TC82 1133 aaKnown RBP14.97□□□□□ -0.01
CTNS-201ENST00000046640 MKNK2Q9HBH9 465 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 LRRC4BQ9NT99 713 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 IMPACTQ9P2X3 320 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
CTNS-201ENST00000046640 FAM237AA0A1B0GTK4 181 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 GOLGA8HP0CJ92 632 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 PTGDRQ13258 359 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 ATP8A2Q9NTI2 1148 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 STX8Q9UNK0 236 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 NFE2L3Q9Y4A8 694 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 NID2Q14112 1375 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.96□□□□□ -0.01
CTNS-201ENST00000046640 IKBKBO14920 756 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 SEMA3EO15041 775 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 PLCD1P51178 756 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 IL17RBQ9NRM6 502 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 SAMSN1Q9NSI8 373 aaKnown RBP14.96□□□□□ -0.01
CTNS-201ENST00000046640 CEP131Q9UPN4 1083 aa14.96□□□□□ -0.01
CTNS-201ENST00000046640 CNTNAP5Q8WYK1 1306 aa14.96□□□□□ -0.02
CTNS-201ENST00000046640 NPY5RQ15761 445 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 MEX3CQ5U5Q3 659 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 KAT14Q9H8E8 782 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 RBM28Q9NW13 759 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.95□□□□□ -0.02
CTNS-201ENST00000046640 ACTN4O43707 911 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 TERF2Q15554 542 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 TTC38Q5R3I4 469 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 CREBRFQ8IUR6 639 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 BLZF1Q9H2G9 400 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 BRMS1Q9HCU9 246 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 HOOK1Q9UJC3 728 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 RREB1Q92766 1687 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 COL5A3P25940 1745 aaPredicted RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 DUOX1Q9NRD9 1551 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 SEC31AO94979 1220 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 TOP1P11387 765 aaKnown RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 CLCN6P51797 869 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 MNS1Q8NEH6 495 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 CARD6Q9BX69 1037 aa14.95□□□□□ -0.02
CTNS-201ENST00000046640 ARPP21Q9UBL0 812 aaPredicted RBP14.95□□□□□ -0.02
CTNS-201ENST00000046640 POLR3GO15318 223 aaPredicted RBP14.94□□□□□ -0.02
CTNS-201ENST00000046640 FGRP09769 529 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 CALM1P0DP23 149 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 CALM2P0DP24 149 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 CALM3P0DP25 149 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 SCG2P13521 617 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 GPSM2P81274 684 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 RGS22Q8NE09 1264 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 RPGRQ92834 1020 aaKnown RBP14.94□□□□□ -0.02
CTNS-201ENST00000046640 MED15Q96RN5 788 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 ORC4O43929 436 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 UFL1O94874 794 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 RCAN1P53805 252 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 ADKP55263 362 aaKnown RBP14.94□□□□□ -0.02
CTNS-201ENST00000046640 GRAPQ13588 217 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 PNMA1Q8ND90 353 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 GRAPLQ8TC17 118 aaPredicted RBP14.94□□□□□ -0.02
CTNS-201ENST00000046640 UBXN4Q92575 508 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 INTS13Q9NVM9 706 aa14.94□□□□□ -0.02
CTNS-201ENST00000046640 ZBTB22O15209 634 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 DDAH1O94760 285 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 PPP2R5BQ15173 497 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 TRERF1Q96PN7 1200 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 KIF2AO00139 706 aaPredicted RBP14.93□□□□□ -0.02
CTNS-201ENST00000046640 FANCGO15287 622 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 GABPB1Q06547 395 aaPredicted RBP14.93□□□□□ -0.02
CTNS-201ENST00000046640 C12orf60Q5U649 245 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 PRR5LQ6MZQ0 368 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 FNBP4Q8N3X1 1017 aaPredicted RBP14.93□□□□□ -0.02
CTNS-201ENST00000046640 PLIN2Q99541 437 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 ZSWIM4Q9H7M6 989 aa14.93□□□□□ -0.02
CTNS-201ENST00000046640 LAMB2P55268 1798 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 ETF1P62495 437 aaKnown RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 SPTY2D1Q68D10 685 aaPredicted RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 PAGE5Q96GU1 130 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 PSDA5PKW4 1024 aaPredicted RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 CD44P16070 742 aaKnown RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 MORC3Q14149 939 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 TYW1BQ6NUM6 668 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 ZNF444Q8N0Y2 327 aaPredicted RBP14.92□□□□□ -0.02
CTNS-201ENST00000046640 DESI2Q9BSY9 194 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 MAPK8IP1Q9UQF2 711 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 MYH6P13533 1939 aa14.92□□□□□ -0.02
CTNS-201ENST00000046640 IL17AQ16552 155 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 HEATR3Q7Z4Q2 680 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 ZNF579Q8NAF0 562 aaKnown RBP14.91□□□□□ -0.02
CTNS-201ENST00000046640 TNFRSF25Q93038 417 aa14.91□□□□□ -0.02
CTNS-201ENST00000046640 FAM205AQ6ZU69 1335 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms