RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 MED23Q9ULK4 1368 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 SHTN1A0MZ66 631 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 MRPL44Q9H9J2 332 aaKnown RBP12.37□□□□□ -0.43
RGPD5-201ENST00000016946 PFKFB2O60825 505 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 ZBTB7AO95365 584 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 OSBPP22059 807 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 INF2Q27J81 1249 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 NELFCDQ8IXH7 590 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 GUCA1BQ9UMX6 200 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 GDF11O95390 407 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 DYNLL1P63167 89 aaKnown RBP12.37□□□□□ -0.43
RGPD5-201ENST00000016946 ME3Q16798 604 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 PLA2G4DQ86XP0 818 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 OTUD6BQ8N6M0 293 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 NCAPD2Q15021 1401 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 GCNT3O95395 438 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 CDC37L1Q7L3B6 337 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 KRT26Q7Z3Y9 468 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 ZBTB8OSQ8IWT0 167 aa12.37□□□□□ -0.43
RGPD5-201ENST00000016946 SYNMO15061 1565 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
RGPD5-201ENST00000016946 DIXDC1Q155Q3 683 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 METTL13Q8N6R0 699 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 TBC1D7Q9P0N9 293 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 PAXBP1Q9Y5B6 917 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 ZMYM6O95789 1325 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 TTLL1O95922 423 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
RGPD5-201ENST00000016946 ANTXR1Q9H6X2 564 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 ZNF202O95125 648 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 PI16Q6UXB8 463 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 RNF34Q969K3 372 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 VPS16Q9H269 839 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 KRT19P08727 400 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 SLFN12Q8IYM2 578 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 TEKT3Q9BXF9 490 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 CD19P15391 556 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 HLFQ16534 295 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 ASPRV1Q53RT3 343 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 PALD1Q9ULE6 856 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 PCDHA12Q9UN75 941 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 TSPOAP1O95153 1857 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 XKR9Q5GH70 373 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 CCDC155Q8N6L0 562 aa12.36□□□□□ -0.43
RGPD5-201ENST00000016946 USP17L8P0C7I0 530 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 GRIPAP1Q4V328 841 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 SPOUT1Q5T280 376 aaKnown RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 PPP1R14CQ8TAE6 165 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 COL15A1P39059 1388 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 ADD2P35612 726 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 IQCGQ9H095 443 aaKnown RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 NRBP2Q9NSY0 501 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 SPATA31A6Q5VVP1 1343 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 SYNRGQ9UMZ2 1314 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 TRIM14Q14142 442 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 POLA2Q14181 598 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 DTNBO60941 627 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 STAMBPO95630 424 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 RNF169Q8NCN4 708 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 CGNQ9P2M7 1197 aaKnown RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 IGSF22Q8N9C0 903 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 ARHGEF1Q92888 912 aaKnown RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 ZNF830Q96NB3 372 aaPredicted RBP12.35□□□□□ -0.43
RGPD5-201ENST00000016946 SUGCTQ9HAC7 445 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 ZSWIM6Q9HCJ5 1215 aa12.35□□□□□ -0.43
RGPD5-201ENST00000016946 CTAGE9A4FU28 777 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
RGPD5-201ENST00000016946 H0YCG3 227 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 RASGRF1Q13972 1273 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
RGPD5-201ENST00000016946 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
RGPD5-201ENST00000016946 POSTNQ15063 836 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 LCORLQ8N3X6 602 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 STAMQ92783 540 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 MTUS1Q9ULD2 1270 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 CTR9Q6PD62 1173 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 GPBP1Q86WP2 473 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 TRMT2AQ8IZ69 625 aaKnown RBP12.34□□□□□ -0.43
RGPD5-201ENST00000016946 LARSQ9P2J5 1176 aaKnown RBP12.34□□□□□ -0.43
RGPD5-201ENST00000016946 BMP3P12645 472 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 TMOD1P28289 359 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 PODNQ7Z5L7 613 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 ADPGKQ9BRR6 497 aa12.34□□□□□ -0.43
RGPD5-201ENST00000016946 CYP19A1P11511 503 aaPredicted RBP12.33□□□□□ -0.43
RGPD5-201ENST00000016946 MRPS9P82933 396 aaKnown RBP12.33□□□□□ -0.43
RGPD5-201ENST00000016946 CFAP65Q6ZU64 1925 aaKnown RBP12.33□□□□□ -0.43
RGPD5-201ENST00000016946 SREK1Q8WXA9 508 aaKnown RBP12.33□□□□□ -0.43
RGPD5-201ENST00000016946 NBPF3Q9H094 633 aa12.33□□□□□ -0.43
RGPD5-201ENST00000016946 ADCY9O60503 1353 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms