RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 SEPT4O43236 478 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 SMAD3P84022 425 aaKnown RBP13.56□□□□□ -0.24
NME1-201ENST00000013034 ATP8B2P98198 1209 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
NME1-201ENST00000013034 SLC39A5Q6ZMH5 540 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 MOV10L1Q9BXT6 1211 aaKnown RBP13.56□□□□□ -0.24
NME1-201ENST00000013034 SPATC1LQ9H0A9 340 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 PDLIM7Q9NR12 457 aa13.56□□□□□ -0.24
NME1-201ENST00000013034 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
NME1-201ENST00000013034 NAV1Q8NEY1 1877 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 DNAH12Q6ZR08 3092 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 MS4A1P11836 297 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 GUCY1A2P33402 732 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 GABPAQ06546 454 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 COG2Q14746 738 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 SEPT2Q15019 361 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 TRIM60Q495X7 471 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 C1orf53Q5VUE5 145 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 ABRAQ8N0Z2 381 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 MAFAQ8NHW3 353 aaPredicted RBP13.55□□□□□ -0.24
NME1-201ENST00000013034 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
NME1-201ENST00000013034 TANGO6Q9C0B7 1094 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 PRDM5Q9NQX1 630 aaPredicted RBP13.55□□□□□ -0.24
NME1-201ENST00000013034 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 ROBO3Q96MS0 1386 aa13.55□□□□□ -0.24
NME1-201ENST00000013034 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
NME1-201ENST00000013034 MYO5AQ9Y4I1 1855 aaKnown RBP13.55□□□□□ -0.24
NME1-201ENST00000013034 RLFQ13129 1914 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 TMEM265A0A087WTH1 108 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 BCAR3O75815 825 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 ERCC3P19447 782 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 PLCD1P51178 756 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 SHHQ15465 462 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 EAF2Q96CJ1 260 aaPredicted RBP13.54□□□□□ -0.24
NME1-201ENST00000013034 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
NME1-201ENST00000013034 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
NME1-201ENST00000013034 MROH8Q9H579 483 aa13.54□□□□□ -0.24
NME1-201ENST00000013034 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
NME1-201ENST00000013034 LRRC41Q15345 812 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 BADQ92934 168 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 CRNKL1Q9BZJ0 848 aaKnown RBP13.53□□□□□ -0.24
NME1-201ENST00000013034 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 NRBP1Q9UHY1 535 aa13.53□□□□□ -0.24
NME1-201ENST00000013034 VCANP13611 3396 aa13.52□□□□□ -0.24
NME1-201ENST00000013034 SPTBN5Q9NRC6 3674 aaKnown RBP13.52□□□□□ -0.25
NME1-201ENST00000013034 MAGEB6P1A0A0J9YX57 407 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 A0A1W2PRG0 241 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
NME1-201ENST00000013034 COBLO75128 1261 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 ADCYAP1R1P41586 468 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
NME1-201ENST00000013034 ANO1Q5XXA6 986 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 B4GALNT3Q6L9W6 998 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 ERC1Q8IUD2 1116 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 MAML3Q96JK9 1138 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 SEMA6BQ9H3T3 888 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
NME1-201ENST00000013034 TRIM43BA6NCK2 446 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 FLOT1O75955 427 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
NME1-201ENST00000013034 FOSL2P15408 326 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 DSG3P32926 999 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 NCAPG2Q86XI2 1143 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
NME1-201ENST00000013034 MYLIPQ8WY64 445 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 TRIM43Q96BQ3 446 aaPredicted RBP13.51□□□□□ -0.25
NME1-201ENST00000013034 TTYH1Q9H313 450 aaPredicted RBP13.51□□□□□ -0.25
NME1-201ENST00000013034 ARHGEF10LQ9HCE6 1279 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 MCM9Q9NXL9 1143 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 PHF24Q9UPV7 400 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
NME1-201ENST00000013034 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
NME1-201ENST00000013034 SLC25A27O95847 323 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 CLTBP09497 229 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 RARBP10826 455 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 FCER1AP12319 257 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 ICA1Q05084 483 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 PLS1Q14651 629 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 AACSQ86V21 672 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 ITPRIPQ8IWB1 547 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 FERMT2Q96AC1 680 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 ATG4CQ96DT6 458 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 RNPC3Q96LT9 517 aaKnown RBP13.5□□□□□ -0.25
NME1-201ENST00000013034 XPNPEP3Q9NQH7 507 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 TACC3Q9Y6A5 838 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 CDH23Q9H251 3354 aa13.5□□□□□ -0.25
NME1-201ENST00000013034 PDE6AP16499 860 aa13.49□□□□□ -0.25
NME1-201ENST00000013034 TLE2Q04725 743 aa13.49□□□□□ -0.25
NME1-201ENST00000013034 SLC9C2Q5TAH2 1124 aa13.49□□□□□ -0.25
NME1-201ENST00000013034 SH3RF1Q7Z6J0 888 aa13.49□□□□□ -0.25
NME1-201ENST00000013034 RNF180Q86T96 592 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms