RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Slf2Q6P9P0 1278 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Recql4Q75NR7 1216 aaKnown RBP19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Epn1Q80VP1 575 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cyp4f39Q8BGU0 532 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Setdb2Q8C267 713 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Krt222Q8CCX5 294 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cdhr2E9Q7P9 1308 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ulk4Q3V129 1303 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Col18a1P39061 1774 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Scgb2b19J3QM75 112 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 GpiP06745 558 aaKnown RBP19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cdh15P33146 784 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ccp110Q7TSH4 1004 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Prpf40bQ80W14 870 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cadps2Q8BYR5 1297 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ccdc14Q8K2J4 934 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Trim29Q8R2Q0 587 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Prpf3Q922U1 683 aaKnown RBP19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 CpvlQ9D3S9 478 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Tpcn1Q9EQJ0 817 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Phlpp1Q8CHE4 1687 aa19.62■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Prr5lA2AVJ5 370 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ica1lQ3TY65 431 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Plekha7Q3UIL6 1118 aaKnown RBP19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Igbp1Q61249 340 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Fhod1Q6P9Q4 1197 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cfap100Q80VN0 613 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Q8C5C9 218 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Enc1O35709 589 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ranbp1P34022 203 aaKnown RBP19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Usp5P56399 858 aaKnown RBP19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cct6aP80317 531 aaKnown RBP19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Emc10Q3TAS6 258 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Kif1bpQ6ZPU9 617 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Spice1Q8C804 860 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Trim34aQ99PP6 485 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Mtfr1lQ9CWE0 289 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Tmem39aQ9CYC3 486 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Greb1lB9EJV3 1913 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Bcl9lQ67FY2 1494 aa19.61■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cdr2P97817 455 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Tcp11Q01755 566 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 E2f4Q8R0K9 410 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Kif23E9Q5G3 953 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 MthfslL7N466 203 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Usp50Q6P8X6 390 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 LpxnQ99N69 386 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 4931408C20RikE9PWP9 1381 aa19.6■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cnbd1B1AWM0 430 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Api5O35841 504 aaKnown RBP19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 GabrdP22933 449 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Exoc8Q6PGF7 716 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Slc39a11Q8BWY7 342 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Krtap5-3Q9D226 196 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Myo1hQ9D6A1 958 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cwc15Q9JHS9 229 aaKnown RBP19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Stx8O88983 236 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Meis3P97368 378 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Smarcc1P97496 1104 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Top1Q04750 767 aaKnown RBP19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 SfswapQ3USH5 945 aaKnown RBP19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Tango6Q8C3S2 1079 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Syf2Q9D198 242 aaKnown RBP19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Fbxo3Q9DC63 480 aa19.59■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Cyp2c23E9Q5K4 494 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Esco1Q69Z69 843 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Jmjd4Q8BFT6 427 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Slx1bQ8BX32 270 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 MtrrQ8C1A3 696 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Znf131Q8K3J5 619 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 ZgpatQ8VDM1 511 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Dbndd2Q9CRD4 158 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Calml3Q9D6P8 149 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Myo1cQ9WTI7 1063 aa19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Znf638Q61464 1960 aaKnown RBP19.58■□□□□ 0.73
Ckap4-202ENSMUST00000167671 Ankrd31A0A140LI88 1765 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Gm5134E9QAB5 671 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Stat5bP42232 786 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 DSCC1Q14AI0 399 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Ehmt1Q5DW34 1296 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Hdac4Q6NZM9 1076 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 QarsQ8BML9 775 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Eif4enif1Q9EST3 983 aaKnown RBP19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Sorbs3Q9R1Z8 733 aa19.58■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Mapkapk5O54992 473 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 PpardP35396 440 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Mars2Q499X9 586 aaKnown RBP19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Cct6bQ61390 531 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Arhgef6Q8K4I3 771 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Nup133Q8R0G9 1155 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Rapgef3Q8VCC8 918 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Fkbp1aP26883 108 aaKnown RBP19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Ifit1bl2Q3U687 466 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Txndc16Q7TN22 820 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Kif2bQ8C0N1 668 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 AdarQ99MU3 1178 aaKnown RBP19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Scrn1Q9CZC8 414 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Myh3P13541 1940 aa19.57■□□□□ 0.72
Ckap4-202ENSMUST00000167671 MeiocA2AG06 965 aa19.56■□□□□ 0.72
Ckap4-202ENSMUST00000167671 Apol7aB2RT54 418 aa19.56■□□□□ 0.72
Retrieved 100 of 22,080 RNA–protein pairs in 14.1 ms