RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Ampd3O08739 766 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Zfy1P10925 782 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Klra9Q2TJJ8 266 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Usp49Q6P9L4 685 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tekt3Q6X6Z7 490 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Prpf40bQ80W14 870 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gimap5Q8BWF2 308 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Vps53Q8CCB4 832 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Vmn1r218Q8R261 298 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Fam84aQ9D650 292 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Klra10Q9R1G6 266 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cdc42bpbQ7TT50 1713 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ugt1a8D3Z748 530 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ugt1a10E9PXN7 530 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccng2O08918 344 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tbc1d1Q60949 1255 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Eif3bQ8JZQ9 803 aaKnown RBP13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Q9CYI0 393 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Rsrc1Q9DBU6 334 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cdk5rap2Q8K389 1822 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Snx12O70493 165 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gpcpd1Q8C0L9 675 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Arfgap2Q99K28 520 aa13.73□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 DgkiD3YWQ0 1071 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tpp1O89023 562 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Pabpc4Q6PHQ9 660 aaKnown RBP13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Dnph1Q80VJ3 173 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 HhatQ8BMT9 499 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Znf704Q9ERQ3 566 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Usp42B2RQC2 1324 aaKnown RBP13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Slc7a1Q09143 622 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Rbm28Q8CGC6 750 aaKnown RBP13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Pcdha12Q91Y18 950 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Wdr17E9Q271 1322 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cyp2d34L7N463 504 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Gjc1P28229 396 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ercc5P35689 1170 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccnl1Q52KE7 532 aaKnown RBP13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ttf2Q5NC05 1138 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Tbc1d5Q80XQ2 815 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Arhgap18Q8K0Q5 663 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Slc35f6Q8VE96 372 aa13.72□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Zfp275G3X904 499 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 G3bp2P97379 482 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 HmmrQ00547 794 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 C87499Q3UX49 493 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Nlrp2Q4PLS0 1046 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cyfip2Q5SQX6 1253 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Sh3gl2Q62420 352 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Sval3Q76I99 144 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Camsap3Q80VC9 1252 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Trpa1Q8BLA8 1125 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 ImmtQ8CAQ8 757 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Kcnq3Q8K3F6 873 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Taf6lQ8R2K4 616 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ddx47Q9CWX9 455 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Ccdc105Q9D4K7 499 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 NgdnQ9DB96 315 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Copb1Q9JIF7 953 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Rc3h1Q4VGL6 1130 aaKnown RBP13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Zbed4Q80WQ9 1168 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Spata4Q8K3V1 295 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Cnot6lQ8VEG6 555 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Krt82Q99M74 516 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Mapk8ip1Q9WVI9 707 aa13.71□□□□□ -0.21
Pcdh1-202ENSMUST00000159405 Otud7bB2RUR8 840 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Pde8aO88502 823 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Fam207aP58468 219 aaKnown RBP13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 HelqQ2VPA6 1069 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Arhgef16Q3U5C8 713 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Ift20Q61025 132 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 OplahQ8K010 1288 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Pcdha5Q91Y15 934 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 EpgnQ924X1 152 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Znf335A2A5K6 1337 aa13.71□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Fbf1A2A870 1173 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Cyp26a1O55127 497 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Ccdc138Q0VF22 680 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 DnmbpQ6TXD4 1580 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Stk38lQ7TSE6 464 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Eno4Q8C042 619 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Ankrd2Q9WV06 328 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 ErmardE9Q048 622 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Eif4a1P60843 406 aaKnown RBP13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Micall1Q8BGT6 870 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Rnf34Q99KR6 376 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Tex19.1Q99MV2 351 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Plekhd1B2RPU2 505 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Tmprss11aQ3UQ41 389 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Ccdc160Q3UYG1 323 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Slc51bQ80WK2 128 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Csrnp2Q8BGQ2 534 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Caps2Q8BUG5 550 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Klhl7Q8BUL5 586 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Dis3l2Q8CI75 870 aaKnown RBP13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Gucy1a3Q9ERL9 691 aa13.7□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Vmn2r78K7N6U5 853 aa13.69□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 ChukQ60680 745 aa13.69□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Ddx3yQ62095 658 aaKnown RBP13.69□□□□□ -0.22
Pcdh1-202ENSMUST00000159405 Txndc16Q7TN22 820 aa13.69□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms