RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Prkg1P0C605 671 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gucy2fQ5SDA5 1108 aa12.94□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gm38392E9Q2A2 434 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Slc12a2P55012 1205 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Slc27a1Q60714 646 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Fgd5Q80UZ0 1219 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Slc51bQ80WK2 128 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Maip1Q8BHE8 291 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Scyl2Q8CFE4 930 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Lrp2bpQ9D4C6 346 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 AatfQ9JKX4 526 aaKnown RBP12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 AlkP97793 1621 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tcp10bE9PYJ0 438 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 P4ha1Q60715 534 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Rexo1Q7TT28 1213 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ints8Q80V86 995 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Klhl40Q9D783 621 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gm2030D3Z7C4 212 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Trove2O08848 538 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Mybl2P48972 704 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 CoilQ5SU73 570 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Fxr1Q61584 677 aaKnown RBP12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tcp10aQ80W76 438 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 PdhbQ9D051 359 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Kdm5cP41230 1554 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 FancaQ9JL70 1439 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Slc27a3O88561 667 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Rps8P62242 208 aaKnown RBP12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 PsdQ5DTT2 1024 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ces3aQ63880 571 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Lrrc41Q8K1C9 807 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ces3bQ8VCU1 571 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cabp7Q91ZM8 215 aa12.93□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc160Q3UYG1 323 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Smim5Q8BT42 78 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tbx22Q8K402 517 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cacnb1Q8R3Z5 597 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Pex3Q9QXY9 372 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Mast1Q9R1L5 1570 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cetn3O35648 167 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Sem1P60897 70 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Carmil2Q3V3V9 1296 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Krt74Q6IFZ9 495 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Hook2Q7TMK6 716 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 CerkQ8K4Q7 531 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Nxf1Q99JX7 618 aaKnown RBP12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cpb1B2RS76 415 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gigyf2Q6Y7W8 1291 aaKnown RBP12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Znf76Q8BMU0 568 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Syce1Q9D495 329 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tpcn1Q9EQJ0 817 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cacna2d3Q9Z1L5 1091 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Adgrl1Q80TR1 1466 aa12.92□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Clcn6O35454 870 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tspyl1O88852 379 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Atp8a2P98200 1148 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Fmnl3Q6ZPF4 1028 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Rsad2Q8CBB9 362 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 HdlbpQ8VDJ3 1268 aaKnown RBP12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 StrbpQ91WM1 672 aaKnown RBP12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Card14Q99KF0 999 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cap2Q9CYT6 476 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Foxp4Q9DBY0 795 aaKnown RBP12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Copb1Q9JIF7 953 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Sept6Q9R1T4 434 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Znf608Q56A10 1511 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Snapc4Q8BP86 1333 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Stmn2P55821 179 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ube2oQ6ZPJ3 1288 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Epn1Q80VP1 575 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Dclk3Q8BWQ5 790 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Serpinb13Q8CDC0 389 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Apbb1ipQ8R5A3 670 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tagap1P0CAX8 505 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Polr2fP61219 127 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Tcp11Q01755 566 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Sap30bpQ02614 308 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 LbrQ3U9G9 626 aaKnown RBP12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Birc2Q62210 612 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Fgfr1opQ66JX5 399 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Taok3Q8BYC6 898 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Cfap36Q8C6E0 343 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Stn1Q8K2X3 378 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Efhd1Q9D4J1 240 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Stk11Q9WTK7 436 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Parp2O88554 559 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Rcn2Q8BP92 320 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Usp37Q8C0R0 979 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Atad2Q8CDM1 1040 aa12.91□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ap1b1O35643 943 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Surf6P70279 355 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ctdnep1Q3TP92 244 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gpcpd1Q8C0L9 675 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc113Q8C5T8 377 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 1700020D05RikQ99PB1 294 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ccdc91Q9D8L5 442 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Gtf2iQ9ESZ8 998 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Ift81O35594 676 aa12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Parp1P11103 1013 aaKnown RBP12.9□□□□□ -0.34
Ndc1-204ENSMUST00000139560 Sparcl1P70663 650 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms