RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Bin2D3Z6Q9 489 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Usp5P56399 858 aaKnown RBP12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Foxp1P58462 705 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Kifap3P70188 793 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Znf697Q569E7 569 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cct8l1Q80YT3 562 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cyp4f39Q8BGU0 532 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Spice1Q8C804 860 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Pcdha12Q91Y18 950 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ppp4r3bQ922R5 820 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Mfap3Q922T2 349 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Brms1Q99N20 246 aa12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tjp1P39447 1745 aaKnown RBP12.88□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Unc13bQ9Z1N9 1602 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc174Q3U155 467 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Fam160b2Q80YR2 744 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Alx1Q8C8B0 326 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ubac1Q8VDI7 409 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gm43738A0A0G2JEA5 862 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Zbtb7aO88939 569 aaKnown RBP12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Impdh2P24547 514 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Pbx1P41778 430 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tmem165P52875 323 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 NeblQ0II04 452 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Slc27a1Q60714 646 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 PrimpolQ6P1E7 537 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 RgmbQ7TQ33 436 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Fam163bQ8BUM6 167 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Fam193aQ8CGI1 1231 aaKnown RBP12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Znf131Q8K3J5 619 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Rbm19Q8R3C6 952 aaKnown RBP12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ciao1Q99KN2 339 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cnpy3Q9DAU1 276 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Slit1Q80TR4 1531 aa12.87□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 A0A1Y7VML8 143 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc24E9PUW8 296 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Dnajc21E9Q8D0 531 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Top1Q04750 767 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Fam71bQ5STT6 665 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cep131Q62036 1060 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Rnf187Q8BFX1 236 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Phldb2Q8K1N2 1249 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Znf704Q9ERQ3 566 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Itga2bQ9QUM0 1033 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Col14a1Q80X19 1797 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Mast3Q3U214 1321 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tpp1O89023 562 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Myl3P09542 204 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cyp19a1P28649 503 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tdo2P48776 406 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Rc3h1Q4VGL6 1130 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gngt1Q61012 74 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Erlin2Q8BFZ9 340 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc14Q8K2J4 934 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Tube1Q9D6T1 475 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 AvenQ9D9K3 342 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 WtapQ9ER69 396 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Med23Q80YQ2 1367 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Col3a1P08121 1464 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Myh2G3UW82 1942 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ezh2Q61188 746 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Brsk2Q69Z98 735 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Clca2Q8BG22 942 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cep128Q8BI22 1102 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 4930572O03RikQ8C5Y0 211 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Leng8Q8CBY3 785 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Eif3bQ8JZQ9 803 aaKnown RBP12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Eps8l2Q99K30 729 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Dbndd2Q9CRD4 158 aa12.86□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Akap2O54931 893 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Ccdc114Q3UX62 658 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 ItgadQ3V0T4 1168 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Irak1Q62406 710 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Bpifb6Q8BU51 449 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 PpanQ91YU8 470 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 AdarQ99MU3 1178 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Lonrf3Q9D4H7 753 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Paip2Q9D6V8 124 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Nfu1Q9QZ23 255 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Lama4P97927 1816 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Pus7B7ZNL8 666 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 C2cd2E9Q3C1 696 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Hnrnph1O35737 449 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Lrrc4bP0C192 709 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Gfpt1P47856 697 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Spout1Q3UHX9 385 aaKnown RBP12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Carmil2Q3V3V9 1296 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Olfr121Q5CZY0 321 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 MtrrQ8C1A3 696 aa12.85□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Epb41l2O70318 988 aaKnown RBP12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cep126Q0VBV7 1103 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Setdb2Q8C267 713 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cap2Q9CYT6 476 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Cfap45Q9D9U9 551 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Copb1Q9JIF7 953 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Col18a1P39061 1774 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 4932429P05RikA2ADI4 785 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Zscan20B2KFW1 1030 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Scgb2b19J3QM75 112 aa12.84□□□□□ -0.35
Prpf40b-208ENSMUST00000136980 Slc4a4O88343 1079 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms