RNA–Protein interactions for RNA: ENSMUST00000105595.1

Ssu72-202, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

TSL 1 (best) BASIC

Gene Ssu72, Length 874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72-202ENSMUST00000105595 Prb1Q91X93 504 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 Ivns1abpQ920Q8 642 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 Bco2Q99NF1 532 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 Znf287Q9EQB9 759 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 FAM186AQ9D9R9 1790 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 Dock2Q8C3J5 1828 aa21.32■■□□□ 1
Ssu72-202ENSMUST00000105595 Hcn4O70507 1186 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Sema3fO88632 785 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Atp11aP98197 1187 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Cgnl1Q6AW69 1298 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Adgra1Q8C4G9 578 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Bclaf1Q8K019 919 aaKnown RBP21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Erc1Q99MI1 1120 aa21.31■■□□□ 1
Ssu72-202ENSMUST00000105595 Celf5D3Z4T1 395 aaKnown RBP21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 Gjd2O54851 321 aa21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 Rc3h1Q4VGL6 1130 aaKnown RBP21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 E4f1Q8CCE9 783 aa21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 Nup133Q8R0G9 1155 aa21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 Bmp2kQ91Z96 1138 aa21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 SmapQ9R0P4 181 aaKnown RBP21.3■■□□□ 1
Ssu72-202ENSMUST00000105595 Parp2O88554 559 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 LtkP08923 888 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Mdm2P23804 489 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Pde3bQ61409 1100 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Zbtb39Q6PDK0 712 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 MylipQ8BM54 445 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Dppa3Q8QZY3 150 aa21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Cndp2Q9D1A2 475 aaKnown RBP21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 PhipQ8VDD9 1821 aaKnown RBP21.29■■□□□ 1
Ssu72-202ENSMUST00000105595 Flot1O08917 428 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 TxnP10639 105 aaKnown RBP21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Hoxc10P31257 342 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 MyrflQ3UN70 904 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Pls1Q3V0K9 630 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Supt20hQ7TT00 530 aaKnown RBP21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Scfd1Q8BRF7 639 aaKnown RBP21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 AidaQ8C4Q6 305 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Mb21d2Q8C525 428 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Lmcd1Q8VEE1 365 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Bap1Q99PU7 728 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Alpk1Q9CXB8 1231 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Sapcd2Q9D818 391 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Atp8b3Q6UQ17 1335 aa21.28■■□□□ 1
Ssu72-202ENSMUST00000105595 Gon4lQ9DB00 2260 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Zkscan2G3X952 960 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Hoxa7P02830 229 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Dpf3P58269 378 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Cyp2c29Q64458 490 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 WaplQ65Z40 1200 aaKnown RBP21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Fam170aQ66LM6 333 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Serpinb13Q8CDC0 389 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Ttc8Q8VD72 515 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Ctu1Q99J10 420 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Efcc1Q9JJF6 558 aa21.27■■□□□ 1
Ssu72-202ENSMUST00000105595 Slc1a4O35874 532 aa21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Sfi1Q3UZY0 1216 aaKnown RBP21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Gm10392Q3V3I3 114 aa21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 BaatQ91X34 420 aa21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Akap8Q9DBR0 687 aaKnown RBP21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Col6a3E9PWQ3 3284 aa21.26■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Wfdc16A2A5H4 111 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Il6stQ00560 917 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ccdc33Q3ULW6 985 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Glra4Q61603 456 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Otop3Q80UF9 577 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Siglec10Q80ZE3 688 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Entpd3Q8BFW6 529 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 TicrrQ8BQ33 1889 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Q8C5S3 137 aa21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ftsj3Q9DBE9 838 aaKnown RBP21.25■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ptpn22P29352 802 aa21.24■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Lpar1P61793 364 aa21.24■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Mcm2P97310 904 aa21.24■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Maged1Q9QYH6 775 aaKnown RBP21.24■□□□□ 0.99
Ssu72-202ENSMUST00000105595 AV320801A2AWL3 467 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Skint3A7TZF0 458 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Mfap1aC0HKD8 439 aaKnown RBP21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Mfap1bC0HKD9 439 aaKnown RBP21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 MccE9PWI3 1003 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Gm15023L7MUB4 467 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Pde11aP0C1Q2 933 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Hoxc6P10629 235 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Adgrg2Q8CJ12 1009 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ankrd54Q91WK7 299 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Clstn1Q9EPL2 979 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 GraspQ9JJA9 392 aa21.23■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Usp53P15975 1069 aa21.22■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Tpd52Q62393 224 aa21.22■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Dusp4Q8BFV3 398 aa21.22■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Dock5B2RY04 1868 aa21.22■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ercc3P49135 783 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Fam109bQ14B98 259 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Cep131Q62036 1060 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Swap70Q6A028 585 aaKnown RBP21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Fbxo28Q8BIG4 368 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Fez1Q8K0X8 392 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Ttll1Q91V51 423 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Eaf2Q91ZD6 262 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Znf704Q9ERQ3 566 aa21.21■□□□□ 0.99
Ssu72-202ENSMUST00000105595 Zscan18E9PUD6 809 aa21.2■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms