RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Tldc2A2ACG1 198 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm20425E9Q035 978 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rgs22G3UYX5 1258 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Atp6v0a2P15920 856 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 H2afxP27661 143 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 SrprbP47758 269 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 S100bP50114 92 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 SbdsP70122 250 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zfp317Q8C0Q5 607 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 GptQ8QZR5 496 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Apol8A2VDH7 339 aaKnown RBP11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Arhgap6O54834 987 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sox5P35710 763 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Anks1bQ8BIZ1 1259 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rsad2Q8CBB9 362 aa11.3□□□□□ -0.6
Lig4-201ENSMUST00000095476 Xrcc6P23475 608 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myo6Q64331 1265 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ctnna3Q65CL1 895 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gpbp1Q6NXH3 473 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rab11fip4Q8BQP8 635 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mettl5Q8K1A0 209 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Psmd2Q8VDM4 908 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Cul5Q9D5V5 780 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Fancd2Q80V62 1450 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Arhgap42B2RQE8 841 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nucks1Q80XU3 234 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dmrt2Q8BG36 561 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 F13a1Q8BH61 732 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Clic6Q8BHB9 596 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tmem87aQ8BXN9 555 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Atad2Q8CDM1 1040 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Edc3Q8K2D3 508 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Usp15Q8R5H1 981 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mylk2Q8VCR8 613 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mfap3lQ9D3X9 409 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Hfm1D3Z4R1 1434 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Zfp174B9EJW5 407 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 LtkP08923 888 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Vsnl1P62761 191 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ankrd13cQ3UX43 541 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dhx40Q6PE54 779 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nxf7Q80SZ6 620 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gtpbp10Q8K013 366 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 OvosQ3UU35 1456 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Skor2A7M7C7 1008 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 XlrP05531 208 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Chmp6P0C0A3 200 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Usp5P56399 858 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mkrn3Q60764 544 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ppp2r5bQ6PD28 497 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Kif1bpQ6ZPU9 617 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Daam2Q80U19 1115 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Slc5a1Q8C3K6 665 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nod2Q8K3Z0 1020 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Mrpl50Q8VDT9 159 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dnajc17Q91WT4 303 aa11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 NgdnQ9DB96 315 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Telo2Q9DC40 840 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lmo7E9PYF4 1699 aaKnown RBP11.29□□□□□ -0.6
Lig4-201ENSMUST00000095476 Kif24Q6NWW5 1356 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myl3P09542 204 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gna11P21278 359 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sstr3P30935 428 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Znf697Q569E7 569 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Myl10Q62082 202 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dnajc8Q6NZB0 253 aaKnown RBP11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Lin9Q8C735 542 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tbx22Q8K402 517 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tut1Q8R3F9 869 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Cd274Q9EP73 290 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Dusp10Q9ESS0 483 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Snx1Q9WV80 522 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Prl3d3A0A0M6L0J6 224 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 MarsQ68FL6 902 aaKnown RBP11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Daam1Q8BPM0 1077 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gbp5Q8CFB4 590 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Uba5Q8VE47 403 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gna15P30678 374 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Psmc4P54775 418 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Nab2Q61127 525 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 IqceQ6PCQ0 778 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Pabpc4Q6PHQ9 660 aaKnown RBP11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ctdspl2Q8BG15 465 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 4921530L21RikQ9CQ47 274 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Tcof1O08784 1320 aaKnown RBP11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Timm10P62073 90 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Palb2Q3U0P1 1104 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm10488Q4KL05 212 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm5169Q5M8P2 212 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gm14819Q62478 212 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Sval3Q76I99 144 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Rabep2Q91WG2 554 aa11.28□□□□□ -0.6
Lig4-201ENSMUST00000095476 Kdm5cP41230 1554 aa11.27□□□□□ -0.6
Lig4-201ENSMUST00000095476 Gcc2Q8CHG3 1679 aa11.27□□□□□ -0.6
Lig4-201ENSMUST00000095476 Ephb4P54761 987 aa11.27□□□□□ -0.6
Lig4-201ENSMUST00000095476 Trpa1Q8BLA8 1125 aa11.27□□□□□ -0.6
Lig4-201ENSMUST00000095476 PdhbQ9D051 359 aa11.27□□□□□ -0.6
Lig4-201ENSMUST00000095476 Naip7Q9JIB3 1402 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 Birc2Q62210 612 aa11.27□□□□□ -0.61
Lig4-201ENSMUST00000095476 RbsnQ80Y56 783 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms