RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Krt40Q6IFX3 439 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tcp11l1Q8BTG3 509 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Calcoco1Q8CGU1 691 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Pold4Q9CWP8 107 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Zbtb43Q9DAI4 467 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Plch1Q4KWH5 1682 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Krt24A1L317 512 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tbc1d2B1AVH7 922 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Cdkl5Q3UTQ8 938 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Kif22Q3V300 660 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Nab2Q61127 525 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ccdc93Q7TQK5 629 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Vps37dQ810I0 261 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Syf2Q9D198 242 aaKnown RBP12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Baiap2l1Q9DBJ3 514 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Col3a1P08121 1464 aa12.86□□□□□ -0.35
Trim23-203ENSMUST00000069187 Adssl1P28650 457 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ccdc51Q3URS9 406 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Kcnq3Q8K3F6 873 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Trap1Q9CQN1 706 aaKnown RBP12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 RpainQ9CWY9 219 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ccdc47Q9D024 483 aaKnown RBP12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 ToporslQ9D2F8 683 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tube1Q9D6T1 475 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Col11a2Q64739 1736 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Eif5P59325 429 aaKnown RBP12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ovgp1Q62010 721 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Fam170aQ66LM6 333 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tmem59lQ7TNI2 337 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Trmt44Q9D2Q2 713 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Cxcl11Q9JHH5 100 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ubr3Q5U430 1889 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Cdc27A2A6Q5 825 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Fam107bQ3TGF2 131 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Rnf40Q3U319 1001 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Cct6bQ61390 531 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Trim6Q8BGE7 488 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 BaatQ91X34 420 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Trim11Q99PQ2 467 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Eif2ak3Q9Z2B5 1114 aa12.85□□□□□ -0.35
Trim23-203ENSMUST00000069187 Nek1P51954 1203 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Gja5Q01231 358 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Anks1bQ8BIZ1 1259 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tubgcp2Q921G8 905 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Stag1Q9D3E6 1258 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ccdc39Q9D5Y1 937 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Sil1Q9EPK6 465 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Sik3Q6P4S6 1311 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Kif13bA0A286YCV9 1847 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Atp8b5A3FIN4 1183 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Rnaseh1O70338 285 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 SsbP32067 415 aaKnown RBP12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 LbrQ3U9G9 626 aaKnown RBP12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Tax1bp1Q3UKC1 814 aaKnown RBP12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 AcrbpQ3V140 540 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ppm1eQ80TL0 749 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Sec62Q8BU14 398 aaKnown RBP12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ttc12Q8BW49 704 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Osbpl1aQ91XL9 950 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Mis12Q9CY25 206 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 CpdO89001 1377 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Dnajc21E9Q8D0 531 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Cyp2d9P11714 504 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Traf1P39428 409 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Dynll1P63168 89 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Fhdc1Q3ULZ2 1149 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Ift88Q61371 824 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Prpf6Q91YR7 941 aaKnown RBP12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Col20a1Q923P0 1320 aa12.84□□□□□ -0.35
Trim23-203ENSMUST00000069187 Lrp5Q91VN0 1614 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Tpm3-rs7D3Z2H9 248 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Me1P06801 572 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Cplx2P84086 134 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Ppp1r7Q3UM45 361 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Gpt2Q8BGT5 522 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Spats2Q8K1N4 545 aaKnown RBP12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Gtf2iQ9ESZ8 998 aaKnown RBP12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Olfr247E9PVJ7 320 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Rgs22G3UYX5 1258 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Olfr819K7N727 320 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Ampd3O08739 766 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Epha2Q03145 977 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Vmn1r218Q8R261 298 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Mfap3lQ9D3X9 409 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Znf609Q8BZ47 1413 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Rsph10bE9PYQ0 876 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Gm6588E9Q3K0 461 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Ankrd35E9Q9D8 996 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Acap3Q6NXL5 833 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Clec16aQ80U30 1036 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Rnf41Q8BH75 317 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Tmem179Q8BHH9 233 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Nop9Q8BMC4 636 aaKnown RBP12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 IarsQ8BU30 1262 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Alx1Q8C8B0 326 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Ces1dQ8VCT4 565 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Uba5Q8VE47 403 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Pcdhb22Q91XZ8 794 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Ambra1A2AH22 1300 aa12.83□□□□□ -0.36
Trim23-203ENSMUST00000069187 Pbx1P41778 430 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms