RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tfap4Q9JIZ5 338 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Hmg20bQ9Z104 317 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 A0A1Y7VML8 143 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Madcam1Q61826 405 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cchcr1Q8K2I2 770 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rbm6S4R1W5 1118 aaKnown RBP7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rad50P70388 1312 aa7.93□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Krt28A6BLY7 462 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Skint7A7XV04 395 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cpa2Q504N0 417 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tti2Q8BGV4 512 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Snapc2Q91XA5 359 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Zbtb12Q9Z150 459 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tcof1O08784 1320 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 LdhbP16125 334 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Arhgef2Q60875 985 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 E4f1Q8CCE9 783 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Pspc1Q8R326 523 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Nudt12Q9DCN1 462 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Usp14Q9JMA1 493 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Bub1bQ9Z1S0 1052 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Zkscan16A2ALW2 728 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ftl1P29391 183 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gba2Q69ZF3 918 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Bmp2kQ91Z96 1138 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Aox3G3X982 1335 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm21969J3QJZ1 289 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Armc2Q3URY6 854 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rgl1Q60695 768 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Swap70Q6A028 585 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Smarcc2Q6PDG5 1213 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 PogkQ80TC5 607 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Scfd1Q8BRF7 639 aaKnown RBP7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gripap1Q8VD04 806 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Mtmr4Q91XS1 1190 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gimap3Q99MI6 301 aa7.92□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Vcam1P29533 739 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Eif5P59325 429 aaKnown RBP7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Siglec10Q80ZE3 688 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gprasp2Q8BUY8 826 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Zfp831A2ADM8 1628 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Casq1O09165 405 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Stag2O35638 1231 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cyp26a1O55127 497 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Zfp90Q61967 636 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Usp17leQ7M764 540 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Nim1kQ8BHI9 436 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Terb1Q8C0V1 768 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ccer1Q9CQL2 403 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cul5Q9D5V5 780 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Col1a1P11087 1453 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Dnm1P39053 867 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Q3TYL0 343 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Scnn1aQ61180 699 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Slain1Q68FF7 579 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ranbp6Q8BIV3 1105 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Stac3Q8BZ71 360 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 AnlnQ8K298 1121 aaKnown RBP7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Pla2g12bQ99P27 195 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Mrps25Q9D125 171 aaKnown RBP7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Btaf1E9QAE3 1848 aa7.91□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Col3a1P08121 1464 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Gm4758L7N258 96 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Pkp1P97350 728 aaKnown RBP7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Spryd7Q3TFQ1 196 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Il17raQ60943 864 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Hoxa13Q62424 386 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Podnl1Q6P3Y9 559 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Ccdc148Q6P5U8 527 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 U2af1l4Q8BGJ9 220 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Scfd2Q8BTY8 684 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Cdan1Q8CC12 1239 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Rtn1Q8K0T0 780 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Fam83aQ8K2P2 436 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Mms22lB1AUR6 1238 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Sestd1Q80UK0 696 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Alx1Q8C8B0 326 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Tmem132aQ922P8 1018 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 RragcQ99K70 398 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Hip1rQ9JKY5 1068 aa7.9□□□□□ -1.14
Bdnf-201ENSMUST00000053317 Myh4Q5SX39 1939 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Rabep1O35551 862 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Pde6aP27664 859 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Hoxc10P31257 342 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 LtbrP50284 415 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Zfp91Q62511 572 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Dusp9Q7TNL7 452 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Rps6kb1Q8BSK8 525 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Fam205a1D3YZF6 1314 aa7.9□□□□□ -1.15
Bdnf-201ENSMUST00000053317 LdhaP06151 332 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 PtpraP18052 829 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 PigsQ6PD26 555 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ddx55Q6ZPL9 600 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ssh1Q76I79 1042 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Frmd3Q8BHD4 595 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Atp5c1Q91VR2 298 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Tfcp2Q9ERA0 502 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Ankrd31A0A140LI88 1765 aa7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Nfx1B1AY10 1114 aaKnown RBP7.89□□□□□ -1.15
Bdnf-201ENSMUST00000053317 Wdr78E9PYY5 807 aa7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 41.7 ms