RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Usp54Q8BL06 1588 aaKnown RBP11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Q9D5Q8 446 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Larp6Q8BN59 492 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Tpcn2Q8BWC0 731 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Msantd4Q91YU3 345 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 MthfsQ9D110 203 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Gm9992B2RWK3 458 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Arhgap30Q640N3 1101 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Unc93aQ710D3 458 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Vipas39Q8BGQ1 491 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Lrrd1Q8C0R9 853 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Zkscan3Q91VW9 553 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Efcab2Q9CQ46 164 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Palm3A2TJV2 734 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cacna2d1O08532 1103 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Nub1P54729 614 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Abhd8Q8R0P8 439 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Mfap3Q922T2 349 aa11.78□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Catsper1Q91ZR5 686 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Fgd4Q91ZT5 766 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Magi3Q9EQJ9 1476 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Trpa1Q8BLA8 1125 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Clec4gQ8BNX1 294 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Zfp113Q8C689 439 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Slc4a8Q8JZR6 1089 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Ifih1Q8R5F7 1025 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Cfap70D3YVL2 1141 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 C130026I21RikQ8C898 291 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Lrrc8cQ8R502 803 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 3830403N18RikQ9D6C3 208 aa11.77□□□□□ -0.52
Nipbl-201ENSMUST00000052965 Pcyt1aP49586 367 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Atp1a3Q6PIC6 1013 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Fam217aQ9D9W6 419 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Myh7Q91Z83 1935 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Aox2Q5SGK3 1345 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 XlrP05531 208 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gm10488Q4KL05 212 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ccdc92bQ5SUE3 299 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gm14819Q62478 212 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gimap8Q75N62 688 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Dcaf17Q3TUL7 519 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Srek1ip1Q4V9W2 153 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Lin9Q8C735 542 aa11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Taco1Q8K0Z7 294 aaKnown RBP11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Nip7Q9CXK8 180 aaKnown RBP11.77□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ppp1r13bQ62415 1087 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Dzip1Q8BMD2 852 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Phf20l1Q8CCJ9 1013 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Satb2Q8VI24 733 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Mast3Q3U214 1321 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Exoc5Q3TPX4 708 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gm5169Q5M8P2 212 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Col17a1Q07563 1470 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Rusc2Q80U22 1514 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Nup62clA2AG10 272 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Skor2A7M7C7 1008 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Tbc1d2B1AVH7 922 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Arhgap6O54834 987 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 PparaP23204 468 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ovgp1Q62010 721 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Q8CEZ4 452 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Eef1gQ9D8N0 437 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 GnpatP98192 678 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ifit1bl2Q3U687 466 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ccdc50Q810U5 305 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Pcdhb22Q91XZ8 794 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Bicc1Q99MQ1 977 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Atg3Q9CPX6 314 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Homer2Q9QWW1 354 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Prrc2bQ7TPM1 1486 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Fam114a2Q8VE88 497 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Bzw2Q91VK1 419 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Fkbp6Q91XW8 327 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Nde1Q9CZA6 344 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 PalmdQ9JHU2 551 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Zmynd8A2A484 1235 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Daam2Q80U19 1115 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Wdr60Q8C761 999 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Q8R1Y2 203 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Tmem143Q8VD26 458 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Cbx8Q9QXV1 362 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Apol8A2VDH7 339 aaKnown RBP11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gm14525B1AZA0 212 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Gm2012B1B0R1 212 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Abcb4P21440 1276 aa11.76□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Zc3h12cQ5DTV4 884 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Cep170Q6A065 1588 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ccdc68Q8BVC4 333 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Psma8Q9CWH6 250 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 PzpQ61838 1495 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Tdo2P48776 406 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 MgarpQ8VI64 283 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Cnbd1B1AWM0 430 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Casq2O09161 415 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ephb4P54761 987 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Apol7eQ3UZ24 369 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Ckap2lQ7TS74 745 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Dnaaf1Q9D2H9 634 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Coro7Q9D2V7 922 aa11.75□□□□□ -0.53
Nipbl-201ENSMUST00000052965 Tulp1Q9Z273 543 aa11.75□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms