RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ndufb9Q9CQJ8 179 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 NgdnQ9DB96 315 aaKnown RBP12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Mapk8ip1Q9WVI9 707 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Wdr17E9Q271 1322 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Q8C1R3 189 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Arhgef6Q8K4I3 771 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Spocd1B1ASB6 936 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Sstr3P30935 428 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Phc3Q8CHP6 981 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Asic2Q925H0 512 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Tulp1Q9Z273 543 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 Pard3Q99NH2 1333 aa12.65□□□□□ -0.38
Topbp1-201ENSMUST00000035164 F13a1Q8BH61 732 aa12.65□□□□□ -0.39
Topbp1-201ENSMUST00000035164 GzmnQ920S1 248 aa12.65□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Dip2cE9PWR4 1557 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Dip2aQ8BWT5 1523 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Zfand4D3Z3C6 739 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tpp1O89023 562 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Mx1P09922 631 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cdcp1Q5U462 833 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cct6bQ61390 531 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Leng8Q8CBY3 785 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 AvenQ9D9K3 342 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 NktrP30415 1453 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 4932429P05RikA2ADI4 785 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Eftud2O08810 971 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Prl3d1P18121 224 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Dnm2P39054 870 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Surf6P70279 355 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tekt3Q6X6Z7 490 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 HhatQ8BMT9 499 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 LgsnQ8CIX8 563 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Spata4Q8K3V1 295 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 SncbQ91ZZ3 133 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Eps8l2Q99K30 729 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gkap1Q9JMB0 366 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kdm3aQ6PCM1 1323 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Kiaa0232Q80U59 1396 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tex35Q14BK3 207 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tspyl4Q8VD63 406 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Stk11Q9WTK7 436 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cps1Q8C196 1500 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 CalrP14211 416 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gpbp1Q6NXH3 473 aaKnown RBP12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Fhod1Q6P9Q4 1197 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ttc26Q8BS45 554 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tex19.1Q99MV2 351 aa12.64□□□□□ -0.39
Topbp1-201ENSMUST00000035164 MybP06876 636 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Lrrc4bP0C192 709 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cyp2d9P11714 504 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gjb4Q02738 266 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Glis3Q6XP49 780 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Traf3ip3Q8C0G2 513 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Luc7lQ9CYI4 371 aaKnown RBP12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Akap8Q9DBR0 687 aaKnown RBP12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 ParvgQ9ERD8 331 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Popdc2Q9ES82 367 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 RabggtaQ9JHK4 567 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pkd2l2Q9JLG4 621 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Krt24A1L317 512 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Slc7a3P70423 618 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Drc1Q3USS3 753 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ces3aQ63880 571 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ces3bQ8VCU1 571 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Plekhd1B2RPU2 505 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gm7347D3YYI9 267 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Nfxl1E9Q8I7 918 aaKnown RBP12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Mapkapk5O54992 473 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Nkx2-5P42582 318 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tax1bp1Q3UKC1 814 aaKnown RBP12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Sec31aQ3UPL0 1230 aaKnown RBP12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Tcp10aQ80W76 438 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Bpifb6Q8BU51 449 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Olfm5Q8BU90 496 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Abca14E9Q8F8 1683 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 TxlnbQ8VBT1 685 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cd274Q9EP73 290 aa12.63□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pde8bE9Q4S1 865 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Foxn2E9Q7L6 429 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Atp8a2P98200 1148 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 IntuQ059U7 942 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ccdc157Q5SPX1 718 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ccdc25Q78PG9 208 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Cap2Q9CYT6 476 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pex3Q9QXY9 372 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Pabpc4Q6PHQ9 660 aaKnown RBP12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Naa15Q80UM3 865 aaKnown RBP12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Terb1Q8C0V1 768 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 PdiltQ9DAN1 588 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Klc4Q9DBS5 619 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Rexo5D3YW29 759 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 C2cd2E9Q3C1 696 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Akap2O54931 893 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Gm12185Q5NCB2 835 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Ezh2Q61188 746 aaKnown RBP12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Lrrc59Q922Q8 307 aaKnown RBP12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Apopt1Q9CQW7 192 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Foxo3Q9WVH4 672 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Med23Q80YQ2 1367 aa12.62□□□□□ -0.39
Topbp1-201ENSMUST00000035164 Nf2P46662 596 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 52.5 ms