RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ddx49Q4FZF3 480 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Kif5bQ61768 963 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Kif2bQ8C0N1 668 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Mknk2Q8CDB0 459 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ccdc28aQ8CEI3 192 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Stn1Q8K2X3 378 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 McamQ8R2Y2 648 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Nup58Q8R332 587 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Klhl20Q8VCK5 604 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Lrrc2Q8VDB8 371 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tmco5aQ9D9D5 303 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ltb4r2Q9JJL9 360 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Pdcd6ipQ9WU78 869 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Col16a1Q8BLX7 1580 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cyp3a57D3YYZ0 503 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Card6E9PWH2 1175 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tcp1P11983 556 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Pdrg1P59048 133 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Mex3cQ05A36 652 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ppil4Q9CXG3 492 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Bcl2l12Q9D3J3 255 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 RabggtaQ9JHK4 567 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Glt1d1A4FUP9 346 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eef2kO08796 724 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Fkbp1aP26883 108 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cct5P80316 541 aaKnown RBP11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Zfp781Q0P5U5 243 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tex35Q14BK3 207 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Prdm1Q60636 856 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ppp2r5eQ61151 467 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ccdc189Q6NZQ0 333 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Dpp7Q9ET22 506 aa11.04□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Tnrc6bQ8BKI2 1810 aaKnown RBP11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eddm13E9Q7F5 164 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Dnm2P39054 870 aaKnown RBP11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Map3k9Q3U1V8 1077 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ttll12Q3UDE2 639 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Krt77Q6IFZ6 572 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Camsap3Q80VC9 1252 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 EngaseQ8BX80 734 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Synpo2Q91YE8 1087 aaKnown RBP11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Parp14Q2EMV9 1817 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 NktrP30415 1453 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Sept1P42209 366 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eif3j1Q3UGC7 261 aaKnown RBP11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eif3j2Q66JS6 263 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Eid1Q9DCR4 169 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cxcl11Q9JHH5 100 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Topaz1E5FYH1 1653 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Itsn1Q9Z0R4 1714 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ess2O70279 479 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Abcb4P21440 1276 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Pkp1P97350 728 aaKnown RBP11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm5592Q3V0A6 857 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Arhgef2Q60875 985 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 AsnsQ61024 561 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ppm1mQ8BU27 406 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 NelfbQ8C4Y3 580 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Lzts2Q91YU6 671 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Nrbp1Q99J45 535 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 LpxnQ99N69 386 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Armc9Q9D2I5 817 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Sept14Q9DA97 430 aa11.03□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Apol7aB2RT54 418 aa11.02□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Elmsan1E9Q2I4 1089 aaKnown RBP11.02□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ifih1Q8R5F7 1025 aa11.02□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Cd248Q91V98 765 aa11.02□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Ddx41Q91VN6 622 aaKnown RBP11.02□□□□□ -0.64
Ldlr-201ENSMUST00000034713 Gm30191A0A0U1RNT7 187 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Eif2aQ8BJW6 581 aaKnown RBP11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Tubgcp2Q921G8 905 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Vmn2r68L7N2B3 851 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Agbl1Q09M05 972 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ifit1Q64282 463 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Gigyf2Q6Y7W8 1291 aaKnown RBP11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 JmyQ9QXM1 983 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Plcb1Q9Z1B3 1216 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Traf1P39428 409 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Prpf38aQ4FK66 312 aaKnown RBP11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Rassf10Q8BL43 508 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cfap57Q9D180 1249 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Sept6Q9R1T4 434 aa11.02□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ugt1a5B2RT14 529 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cetn3O35648 167 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 PpardP35396 440 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Depdc1bQ8BH88 529 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Bola3Q8CEI1 110 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Slit1Q80TR4 1531 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Cfap70D3YVL2 1141 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Mx1P09922 631 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Surf6P70279 355 aaKnown RBP11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Swap70Q6A028 585 aaKnown RBP11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Ccdc25Q78PG9 208 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Sdccag8Q80UF4 717 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Spata2Q8K004 515 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 PdclQ9DBX2 301 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Mroh6V9GX81 722 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Akr1c19G3X9Y6 323 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Taok1Q5F2E8 1001 aa11.01□□□□□ -0.65
Ldlr-201ENSMUST00000034713 Nlrp9bQ66X22 1003 aa11.01□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms