RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Nf2P46662 596 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Eef2P58252 858 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Prr7Q3V0I2 269 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cacnb1Q8R3Z5 597 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Mei1Q9D4I2 1268 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Gm11985A0A1B0GS61 206 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Snai1Q02085 264 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cfap157Q0VFX2 523 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ctnna2Q61301 953 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Zswim4Q8C7B8 1101 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tnpo2Q99LG2 887 aaKnown RBP13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Calml3Q9D6P8 149 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Dydc1Q9D9T0 175 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Nwd1A6H603 1563 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Zfp42P22227 288 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Sec62Q8BU14 398 aaKnown RBP13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Nop2Q922K7 793 aaKnown RBP13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Yeats4Q9CR11 227 aaKnown RBP13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 4921524L21RikQ9D5T2 438 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 MicalclQ9D5U9 680 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc51Q3URS9 406 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Rnf187Q8BFX1 236 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Hps6Q8BLY7 805 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Nr2e3Q9QXZ7 395 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Vmn2r23E9PXI5 849 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Serpinc1P32261 465 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Anp32eP97822 260 aaKnown RBP13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc89Q9DA73 370 aa13.48□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Gm10378F6XQQ1 160 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Clec11aO88200 328 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pde1cQ64338 706 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Akap8Q9DBR0 687 aaKnown RBP13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Fbxo3Q9DC63 480 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Plcb1Q9Z1B3 1216 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Lnx1O70263 728 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Neurog2P70447 263 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 LrmpQ60664 539 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 PigsQ6PD26 555 aaKnown RBP13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc181Q80ZU5 509 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Csrnp2Q8BGQ2 534 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cep128Q8BI22 1102 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Yipf1Q91VU1 306 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tbc1d4Q8BYJ6 1307 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Gm5934D3Z4U6 212 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Erlin2Q8BFZ9 340 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Map10Q8BJS7 891 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Lmbrd1Q8K0B2 537 aa13.47□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Arhgef10lA2AWP8 1280 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Prss40A6H6T1 365 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tph1P17532 447 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tnni3P48787 211 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Atp11aP98197 1187 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 SetQ9EQU5 289 aaKnown RBP13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 MetP16056 1379 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pik3c2bE9QAN8 1632 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc191J3QQ27 883 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pdrg1P59048 133 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Jade3Q6IE82 823 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Asic3Q6X1Y6 530 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Calml4Q91WQ9 153 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Egfl6Q9JJZ5 550 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cetn2Q9R1K9 172 aa13.46□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Meis1Q60954 390 aa13.46□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Maats1Q8BRC6 783 aa13.46□□□□□ -0.26
Ctr9-201ENSMUST00000005749 GancQ8BVW0 898 aa13.46□□□□□ -0.26
Ctr9-201ENSMUST00000005749 HdlbpQ8VDJ3 1268 aaKnown RBP13.46□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Tmem47Q9JJG6 181 aa13.46□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Qser1A2BIE1 1698 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Msh6P54276 1358 aaKnown RBP13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Flt1P35969 1333 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Fxr1Q61584 677 aaKnown RBP13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 LdhdQ7TNG8 484 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Spata21Q8BHW6 681 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Sf3b3Q921M3 1217 aaKnown RBP13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Kcnq5Q9JK45 933 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cps1Q8C196 1500 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 1700003F12RikA2AKE5 210 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 NcapgE9PWG6 1004 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Mum1l1Q4VA55 681 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Zfp113Q8C689 439 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Slc12a8Q8VI23 705 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Kdm8Q9CXT6 414 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Zfp853A0A1D5RM95 733 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 A430078G23RikE9Q7Y4 484 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 1700113H08RikE9Q9Q5 327 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Rnaseh1O70338 285 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ctr9Q62018 1173 aaKnown RBP13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Morc2bQ8C5W4 1022 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Stoml1Q8CI66 399 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 TxlnbQ8VBT1 685 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Acot11Q8VHQ9 594 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Slc44a4Q91VA1 707 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Kctd10Q922M3 315 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Sept12Q9D451 317 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Cetn3O35648 167 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Pak1O88643 545 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Nme8Q715T0 586 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Zscan22Q8BGS5 496 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Ccdc94Q9D6J3 314 aa13.45□□□□□ -0.26
Ctr9-201ENSMUST00000005749 Setd1aE9PYH6 1716 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms