RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W ERR3P42222 437 aa3.91□□□□□ -1.78
ROD1YOR018W VPS25P47142 202 aa3.91□□□□□ -1.78
ROD1YOR018W ADI1Q03677 179 aa3.91□□□□□ -1.78
ROD1YOR018W SPO71Q03868 1245 aa3.91□□□□□ -1.78
ROD1YOR018W ERV41Q04651 352 aa3.91□□□□□ -1.78
ROD1YOR018W NDD1Q08887 554 aa3.91□□□□□ -1.78
ROD1YOR018W UPC2Q12151 913 aa3.91□□□□□ -1.78
ROD1YOR018W GPM3Q12326 303 aa3.91□□□□□ -1.78
ROD1YOR018W SEY1Q99287 776 aa3.91□□□□□ -1.78
ROD1YOR018W TOR2P32600 2474 aaKnown RBP3.91□□□□□ -1.78
ROD1YOR018W SPS1P08458 490 aa3.9□□□□□ -1.78
ROD1YOR018W GLN4P13188 809 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W MLS1P30952 554 aa3.9□□□□□ -1.78
ROD1YOR018W VPH1P32563 840 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W KES1P35844 434 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W ALY1P36117 915 aa3.9□□□□□ -1.78
ROD1YOR018W ETR1P38071 380 aa3.9□□□□□ -1.78
ROD1YOR018W KTR4P38131 464 aa3.9□□□□□ -1.78
ROD1YOR018W PRM9P39551 298 aa3.9□□□□□ -1.78
ROD1YOR018W NUP60P39705 539 aa3.9□□□□□ -1.78
ROD1YOR018W PFK26P40433 827 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W UFE1P41834 346 aa3.9□□□□□ -1.78
ROD1YOR018W TES1P41903 349 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W SAM37P50110 327 aa3.9□□□□□ -1.78
ROD1YOR018W YNR063WP53749 607 aa3.9□□□□□ -1.78
ROD1YOR018W YVH1Q02256 364 aaKnown RBP3.9□□□□□ -1.78
ROD1YOR018W NRT1Q08485 598 aa3.9□□□□□ -1.78
ROD1YOR018W CSF1Q12150 2958 aa3.9□□□□□ -1.79
ROD1YOR018W RPP2BP02400 110 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W ILS1P09436 1072 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W SSC1P0CS90 654 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W IMA3P0CW40 589 aa3.9□□□□□ -1.79
ROD1YOR018W IMA4P0CW41 589 aa3.9□□□□□ -1.79
ROD1YOR018W ADH4P10127 382 aa3.9□□□□□ -1.79
ROD1YOR018W KGD2P19262 463 aaPredicted RBP3.9□□□□□ -1.79
ROD1YOR018W RBK1P25332 333 aa3.9□□□□□ -1.79
ROD1YOR018W MCM5P29496 775 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W YBR032WP38223 100 aa3.9□□□□□ -1.79
ROD1YOR018W GIP1P38229 639 aa3.9□□□□□ -1.79
ROD1YOR018W MSC7P38694 644 aa3.9□□□□□ -1.79
ROD1YOR018W MED6P38782 295 aa3.9□□□□□ -1.79
ROD1YOR018W VPS41P38959 992 aa3.9□□□□□ -1.79
ROD1YOR018W PAN6P40459 309 aa3.9□□□□□ -1.79
ROD1YOR018W CCT8P47079 568 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W HLJ1P48353 224 aa3.9□□□□□ -1.79
ROD1YOR018W EMC4P53073 190 aa3.9□□□□□ -1.79
ROD1YOR018W MCM6P53091 1017 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W PEX31P53203 462 aa3.9□□□□□ -1.79
ROD1YOR018W YMR209CQ03648 457 aa3.9□□□□□ -1.79
ROD1YOR018W IMA2Q08295 589 aa3.9□□□□□ -1.79
ROD1YOR018W APC9Q12107 265 aa3.9□□□□□ -1.79
ROD1YOR018W RUD3Q12234 484 aaKnown RBP3.9□□□□□ -1.79
ROD1YOR018W QCR6P00127 147 aa3.89□□□□□ -1.79
ROD1YOR018W HEM13P11353 328 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W AMD1P15274 810 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W SRV2P17555 526 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W ACO1P19414 778 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
ROD1YOR018W BEM1P29366 551 aa3.89□□□□□ -1.79
ROD1YOR018W YME1P32795 747 aa3.89□□□□□ -1.79
ROD1YOR018W SEC6P32844 805 aa3.89□□□□□ -1.79
ROD1YOR018W SRP68P38687 599 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W BTT1P40314 149 aaPredicted RBP3.89□□□□□ -1.79
ROD1YOR018W YIL161WP40449 235 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W UBP7P40453 1071 aa3.89□□□□□ -1.79
ROD1YOR018W SAE2P46946 345 aa3.89□□□□□ -1.79
ROD1YOR018W NNF1P47149 201 aa3.89□□□□□ -1.79
ROD1YOR018W PRP24P49960 444 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W YNR040WP53736 256 aa3.89□□□□□ -1.79
ROD1YOR018W YNL247WP53852 767 aaKnown RBP3.89□□□□□ -1.79
ROD1YOR018W INP2Q03824 705 aa3.89□□□□□ -1.79
ROD1YOR018W FAR8Q05040 523 aa3.89□□□□□ -1.79
ROD1YOR018W ECM38Q05902 660 aaPredicted RBP3.89□□□□□ -1.79
ROD1YOR018W SVS1Q12254 260 aa3.89□□□□□ -1.79
ROD1YOR018W YMR030W-AQ3E760 96 aa3.89□□□□□ -1.79
ROD1YOR018W CCH1P50077 2039 aa3.89□□□□□ -1.79
ROD1YOR018W FAB1P34756 2278 aa3.89□□□□□ -1.79
ROD1YOR018W MPH2P0CD99 609 aa3.89□□□□□ -1.79
ROD1YOR018W CYM1P32898 989 aa3.89□□□□□ -1.79
ROD1YOR018W SRP101P32916 621 aa3.89□□□□□ -1.79
ROD1YOR018W ECM13P38195 257 aa3.89□□□□□ -1.79
ROD1YOR018W PEX28P38848 579 aa3.89□□□□□ -1.79
ROD1YOR018W STN1P38960 494 aa3.89□□□□□ -1.79
ROD1YOR018W YJL107CP42947 387 aa3.89□□□□□ -1.79
ROD1YOR018W ROK1P45818 564 aaPredicted RBP3.89□□□□□ -1.79
ROD1YOR018W YJR098CP47139 656 aa3.89□□□□□ -1.79
ROD1YOR018W TCB2P48231 1178 aa3.89□□□□□ -1.79
ROD1YOR018W GNP1P48813 663 aa3.89□□□□□ -1.79
ROD1YOR018W SAP4P53036 818 aa3.89□□□□□ -1.79
ROD1YOR018W YGL140CP53120 1219 aa3.89□□□□□ -1.79
ROD1YOR018W ARP4P80428 489 aa3.89□□□□□ -1.79
ROD1YOR018W SHR3Q02774 210 aa3.89□□□□□ -1.79
ROD1YOR018W YPL109CQ02981 657 aa3.89□□□□□ -1.79
ROD1YOR018W TMN2Q04562 672 aa3.89□□□□□ -1.79
ROD1YOR018W OMS1Q06668 471 aa3.89□□□□□ -1.79
ROD1YOR018W YLR149CQ99296 730 aa3.89□□□□□ -1.79
ROD1YOR018W PRE9P23638 258 aaKnown RBP3.88□□□□□ -1.79
ROD1YOR018W KAR9P32526 644 aa3.88□□□□□ -1.79
ROD1YOR018W NFU1P32860 256 aa3.88□□□□□ -1.79
ROD1YOR018W YHI9P38765 294 aa3.88□□□□□ -1.79
ROD1YOR018W ELO3P40319 345 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 6.2 ms