RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W SFB2P53953 876 aa6.27□□□□□ -1.41
CAF40YNL288W YHM2Q04013 314 aa6.27□□□□□ -1.41
CAF40YNL288W TDA9Q04545 1251 aa6.27□□□□□ -1.41
CAF40YNL288W ECI1Q05871 280 aa6.27□□□□□ -1.41
CAF40YNL288W IRC10Q08118 586 aa6.27□□□□□ -1.41
CAF40YNL288W FAP7Q12055 197 aaPredicted RBP6.27□□□□□ -1.41
CAF40YNL288W MPD2Q99316 277 aa6.27□□□□□ -1.41
CAF40YNL288W TRP3P00937 484 aa6.26□□□□□ -1.41
CAF40YNL288W RAD10P06838 210 aa6.26□□□□□ -1.41
CAF40YNL288W MIS1P09440 975 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W REV1P12689 985 aa6.26□□□□□ -1.41
CAF40YNL288W PAP1P29468 568 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W GCG1P32656 232 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W RAD5P32849 1169 aaPredicted RBP6.26□□□□□ -1.41
CAF40YNL288W BYE1P36106 594 aa6.26□□□□□ -1.41
CAF40YNL288W URA8P38627 578 aaPredicted RBP6.26□□□□□ -1.41
CAF40YNL288W CCT4P39078 528 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W FLC2P39719 783 aa6.26□□□□□ -1.41
CAF40YNL288W SAW1P39735 261 aa6.26□□□□□ -1.41
CAF40YNL288W DOT6P40059 670 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W MND2P40577 368 aa6.26□□□□□ -1.41
CAF40YNL288W RRT5P43607 289 aa6.26□□□□□ -1.41
CAF40YNL288W TAN1P53072 289 aaPredicted RBP6.26□□□□□ -1.41
CAF40YNL288W RPL22BP56628 122 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W VPS60Q03390 229 aa6.26□□□□□ -1.41
CAF40YNL288W INP2Q03824 705 aa6.26□□□□□ -1.41
CAF40YNL288W URH1Q04179 340 aa6.26□□□□□ -1.41
CAF40YNL288W NSE1Q07913 336 aa6.26□□□□□ -1.41
CAF40YNL288W YLR012CQ07927 99 aa6.26□□□□□ -1.41
CAF40YNL288W YOR387CQ08910 206 aa6.26□□□□□ -1.41
CAF40YNL288W ALG6Q12001 544 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W EFG1Q3E705 233 aaKnown RBP6.26□□□□□ -1.41
CAF40YNL288W SEY1Q99287 776 aa6.26□□□□□ -1.41
CAF40YNL288W TY1A-LR4P0C2I8 440 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W TY1A-DR6P0CX70 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-ER1P0CX71 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-LR2P0CX72 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-PLP0CX73 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-JR1P0CX74 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-LR3P0CX75 440 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-ML2P0CX76 440 aa6.25□□□□□ -1.41
CAF40YNL288W MSB1P21339 1137 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W ADY2P25613 283 aa6.25□□□□□ -1.41
CAF40YNL288W YCR015CP25616 317 aa6.25□□□□□ -1.41
CAF40YNL288W GPI10P30777 616 aa6.25□□□□□ -1.41
CAF40YNL288W CNS1P33313 385 aa6.25□□□□□ -1.41
CAF40YNL288W BIT2P38346 545 aa6.25□□□□□ -1.41
CAF40YNL288W DIA4P38705 446 aaPredicted RBP6.25□□□□□ -1.41
CAF40YNL288W MED6P38782 295 aa6.25□□□□□ -1.41
CAF40YNL288W YEL028WP39989 153 aa6.25□□□□□ -1.41
CAF40YNL288W HEM14P40012 539 aa6.25□□□□□ -1.41
CAF40YNL288W YMR134WP40207 237 aa6.25□□□□□ -1.41
CAF40YNL288W CNN1P43618 361 aa6.25□□□□□ -1.41
CAF40YNL288W SNG1P46950 547 aa6.25□□□□□ -1.41
CAF40YNL288W TRM112P53738 135 aaPredicted RBP6.25□□□□□ -1.41
CAF40YNL288W INA17Q02888 182 aa6.25□□□□□ -1.41
CAF40YNL288W ADI1Q03677 179 aa6.25□□□□□ -1.41
CAF40YNL288W YMR206WQ03695 313 aa6.25□□□□□ -1.41
CAF40YNL288W VTI1Q04338 217 aa6.25□□□□□ -1.41
CAF40YNL288W AVO1Q08236 1176 aa6.25□□□□□ -1.41
CAF40YNL288W TY1A-GR1Q12085 440 aa6.25□□□□□ -1.41
CAF40YNL288W YLL056CQ12177 298 aa6.25□□□□□ -1.41
CAF40YNL288W RIO1Q12196 484 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W TY1A-OLQ92392 440 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W NOP14Q99207 810 aaKnown RBP6.25□□□□□ -1.41
CAF40YNL288W RPS14AP06367 137 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W PYC1P11154 1178 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W KIN3P22209 435 aa6.24□□□□□ -1.41
CAF40YNL288W HEM3P28789 327 aa6.24□□□□□ -1.41
CAF40YNL288W HXT3P32466 567 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W SWE1P32944 819 aa6.24□□□□□ -1.41
CAF40YNL288W ADD66P36040 267 aa6.24□□□□□ -1.41
CAF40YNL288W MRPL40P36534 297 aa6.24□□□□□ -1.41
CAF40YNL288W MSG5P38590 489 aa6.24□□□□□ -1.41
CAF40YNL288W SRP68P38687 599 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W RPS14BP39516 138 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W EXO1P39875 702 aa6.24□□□□□ -1.41
CAF40YNL288W STL1P39932 569 aa6.24□□□□□ -1.41
CAF40YNL288W UBP7P40453 1071 aa6.24□□□□□ -1.41
CAF40YNL288W RPS10BP46784 105 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W RSM26P47141 266 aa6.24□□□□□ -1.41
CAF40YNL288W ART5P53244 586 aaKnown RBP6.24□□□□□ -1.41
CAF40YNL288W DOS2P54858 310 aa6.24□□□□□ -1.41
CAF40YNL288W AAD15Q08361 143 aa6.24□□□□□ -1.41
CAF40YNL288W CLP1Q08685 445 aaPredicted RBP6.24□□□□□ -1.41
CAF40YNL288W RPS10AQ08745 105 aaPredicted RBP6.24□□□□□ -1.41
CAF40YNL288W QCR6P00127 147 aa6.23□□□□□ -1.41
CAF40YNL288W TYE7P33122 291 aaPredicted RBP6.23□□□□□ -1.41
CAF40YNL288W UBC6P33296 250 aaPredicted RBP6.23□□□□□ -1.41
CAF40YNL288W RRP1P35178 278 aaPredicted RBP6.23□□□□□ -1.41
CAF40YNL288W SQT1P35184 431 aa6.23□□□□□ -1.41
CAF40YNL288W YKR073CP36153 106 aa6.23□□□□□ -1.41
CAF40YNL288W POP4P38336 279 aa6.23□□□□□ -1.41
CAF40YNL288W OTU2P38747 307 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W CKB2P38930 258 aa6.23□□□□□ -1.41
CAF40YNL288W ERG10P41338 398 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W DLD2P46681 530 aaKnown RBP6.23□□□□□ -1.41
CAF40YNL288W PEX13P80667 386 aa6.23□□□□□ -1.41
CAF40YNL288W UTP6Q02354 440 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms