RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C INN1P53901 409 aa3.34□□□□□ -1.87
XRN1YGL173C RPL6AQ02326 176 aaKnown RBP3.34□□□□□ -1.87
XRN1YGL173C ARG7Q04728 441 aa3.34□□□□□ -1.87
XRN1YGL173C TY1A-BLQ12266 440 aa3.34□□□□□ -1.87
XRN1YGL173C SRN2Q99176 213 aa3.34□□□□□ -1.87
XRN1YGL173C TUB2P02557 457 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C NOT3P06102 836 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C SIR3P06701 978 aa3.34□□□□□ -1.88
XRN1YGL173C GPH1P06738 902 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C NUC1P08466 329 aa3.34□□□□□ -1.88
XRN1YGL173C MGM1P32266 881 aa3.34□□□□□ -1.88
XRN1YGL173C BUD8P41698 603 aa3.34□□□□□ -1.88
XRN1YGL173C ALK1P43633 760 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C SAE2P46946 345 aa3.34□□□□□ -1.88
XRN1YGL173C COP1P53622 1201 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C YSA1Q01976 231 aa3.34□□□□□ -1.88
XRN1YGL173C YMR111CQ04461 462 aaPredicted RBP3.34□□□□□ -1.88
XRN1YGL173C SNO4Q04902 237 aa3.34□□□□□ -1.88
XRN1YGL173C BOP2Q06150 570 aa3.34□□□□□ -1.88
XRN1YGL173C HSP33Q08914 237 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C HSP32Q08992 237 aa3.34□□□□□ -1.88
XRN1YGL173C CHS5Q12114 671 aaKnown RBP3.34□□□□□ -1.88
XRN1YGL173C HMG2P12684 1045 aa3.33□□□□□ -1.88
XRN1YGL173C CDC23P16522 626 aa3.33□□□□□ -1.88
XRN1YGL173C MCM4P30665 933 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C RPC37P36121 282 aa3.33□□□□□ -1.88
XRN1YGL173C UBP13P38187 747 aa3.33□□□□□ -1.88
XRN1YGL173C GDI1P39958 451 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C YBP2P53169 641 aa3.33□□□□□ -1.88
XRN1YGL173C PDR16P53860 351 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C TAP42Q04372 366 aa3.33□□□□□ -1.88
XRN1YGL173C MRD1Q06106 887 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C YSH1Q06224 779 aaPredicted RBP3.33□□□□□ -1.88
XRN1YGL173C GCD2P12754 651 aaPredicted RBP3.33□□□□□ -1.88
XRN1YGL173C PDC5P16467 563 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C CDC15P27636 974 aa3.33□□□□□ -1.88
XRN1YGL173C DLD1P32891 587 aa3.33□□□□□ -1.88
XRN1YGL173C MLH1P38920 769 aa3.33□□□□□ -1.88
XRN1YGL173C SCS2P40075 244 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C MRX6P48564 524 aa3.33□□□□□ -1.88
XRN1YGL173C FMS1P50264 508 aa3.33□□□□□ -1.88
XRN1YGL173C YPL071CQ02864 156 aa3.33□□□□□ -1.88
XRN1YGL173C MFB1Q04922 465 aa3.33□□□□□ -1.88
XRN1YGL173C AVL9Q12500 764 aa3.33□□□□□ -1.88
XRN1YGL173C GCD1P09032 578 aaPredicted RBP3.33□□□□□ -1.88
XRN1YGL173C APE1P14904 514 aa3.33□□□□□ -1.88
XRN1YGL173C PEX1P24004 1043 aa3.33□□□□□ -1.88
XRN1YGL173C CLB4P24871 460 aa3.33□□□□□ -1.88
XRN1YGL173C UGA3P26370 528 aa3.33□□□□□ -1.88
XRN1YGL173C IFA38P38286 347 aa3.33□□□□□ -1.88
XRN1YGL173C OGG1P53397 376 aaPredicted RBP3.33□□□□□ -1.88
XRN1YGL173C BNI5P53890 448 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C SKO1Q02100 647 aa3.33□□□□□ -1.88
XRN1YGL173C YDR286CQ05530 114 aa3.33□□□□□ -1.88
XRN1YGL173C YLR283WQ05867 314 aa3.33□□□□□ -1.88
XRN1YGL173C BMS1Q08965 1183 aaKnown RBP3.33□□□□□ -1.88
XRN1YGL173C YLR415CO13578 112 aa3.32□□□□□ -1.88
XRN1YGL173C ADE3P07245 946 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C PRP6P19735 899 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C POT1P27796 417 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
XRN1YGL173C CMC1P36064 111 aa3.32□□□□□ -1.88
XRN1YGL173C YKR015CP36111 568 aa3.32□□□□□ -1.88
XRN1YGL173C YBR284WP38150 797 aa3.32□□□□□ -1.88
XRN1YGL173C FTH1P38310 465 aa3.32□□□□□ -1.88
XRN1YGL173C PXA1P41909 870 aa3.32□□□□□ -1.88
XRN1YGL173C BRO1P48582 844 aa3.32□□□□□ -1.88
XRN1YGL173C RFX1P48743 811 aa3.32□□□□□ -1.88
XRN1YGL173C AIM14P53109 570 aa3.32□□□□□ -1.88
XRN1YGL173C DUS1P53759 423 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C IST1P53843 298 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C NCS2P53923 493 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C RPA49Q01080 415 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C GAD1Q04792 585 aa3.32□□□□□ -1.88
XRN1YGL173C NUR1Q12066 484 aa3.32□□□□□ -1.88
XRN1YGL173C SWT1Q12104 458 aa3.32□□□□□ -1.88
XRN1YGL173C YBR126W-AQ8TGU7 68 aa3.32□□□□□ -1.88
XRN1YGL173C URA3P03962 267 aa3.32□□□□□ -1.88
XRN1YGL173C POL12P38121 705 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C YHR122WP38829 231 aa3.32□□□□□ -1.88
XRN1YGL173C CAB2P40506 365 aa3.32□□□□□ -1.88
XRN1YGL173C ULP2P40537 1034 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C VPS64Q03944 604 aa3.32□□□□□ -1.88
XRN1YGL173C LUC7Q07508 261 aaPredicted RBP3.32□□□□□ -1.88
XRN1YGL173C NOP6Q07623 225 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C ATG29Q12092 213 aa3.32□□□□□ -1.88
XRN1YGL173C OSW2Q12202 724 aa3.32□□□□□ -1.88
XRN1YGL173C TRM11Q12463 433 aa3.32□□□□□ -1.88
XRN1YGL173C YBL029C-AQ3E756 94 aa3.32□□□□□ -1.88
XRN1YGL173C NCB2Q92317 146 aa3.32□□□□□ -1.88
XRN1YGL173C KIN2P13186 1147 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C DAL7P21826 554 aa3.32□□□□□ -1.88
XRN1YGL173C NAR1P23503 491 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C PRE8P23639 250 aa3.32□□□□□ -1.88
XRN1YGL173C FPS1P23900 669 aa3.32□□□□□ -1.88
XRN1YGL173C SSE1P32589 693 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C SNU114P36048 1008 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C TOS1P38288 455 aa3.32□□□□□ -1.88
XRN1YGL173C SEC31P38968 1273 aaKnown RBP3.32□□□□□ -1.88
XRN1YGL173C JJJ3P47138 172 aa3.32□□□□□ -1.88
XRN1YGL173C COS5P47187 383 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 30 ms