RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C ATG11Q12527 1178 aa1.39□□□□□ -2.19
SEC3YER008C ISN1Q99312 450 aa1.39□□□□□ -2.19
SEC3YER008C BNR1P40450 1375 aa1.39□□□□□ -2.19
SEC3YER008C URA3P03962 267 aa1.38□□□□□ -2.19
SEC3YER008C KAR3P17119 729 aa1.38□□□□□ -2.19
SEC3YER008C UBC1P21734 215 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C YCK1P23291 538 aa1.38□□□□□ -2.19
SEC3YER008C POT1P27796 417 aaKnown RBP RIP-Chip data1.38□□□□□ -2.19not detected
SEC3YER008C CBF2P32504 956 aa1.38□□□□□ -2.19
SEC3YER008C MRPL36P36531 177 aa1.38□□□□□ -2.19
SEC3YER008C NOP4P37838 685 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C AKL1P38080 1108 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C TAF5P38129 798 aa1.38□□□□□ -2.19
SEC3YER008C CDS1P38221 457 aa1.38□□□□□ -2.19
SEC3YER008C SRP72P38688 640 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C LRP1P38801 184 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C AFG3P39925 761 aa1.38□□□□□ -2.19
SEC3YER008C YEL025CP39991 1188 aa1.38□□□□□ -2.19
SEC3YER008C NOP16P40007 231 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C SPO22P40511 975 aa1.38□□□□□ -2.19
SEC3YER008C AXL1P40851 1208 aa1.38□□□□□ -2.19
SEC3YER008C YJL043WP47053 257 aa1.38□□□□□ -2.19
SEC3YER008C CTR1P49573 406 aa1.38□□□□□ -2.19
SEC3YER008C COG1P53079 417 aa1.38□□□□□ -2.19
SEC3YER008C KTR5P53966 522 aaPredicted RBP1.38□□□□□ -2.19
SEC3YER008C HOT1Q03213 719 aa1.38□□□□□ -2.19
SEC3YER008C YDR132CQ03900 495 aa1.38□□□□□ -2.19
SEC3YER008C ORM2Q06144 216 aa1.38□□□□□ -2.19
SEC3YER008C SLK19Q08581 821 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C ACF2Q12168 779 aa1.38□□□□□ -2.19
SEC3YER008C RTN2Q12443 393 aa1.38□□□□□ -2.19
SEC3YER008C YKL033W-AQ86ZR7 236 aa1.38□□□□□ -2.19
SEC3YER008C SPT7P35177 1332 aa1.38□□□□□ -2.19
SEC3YER008C ROX1P25042 368 aa1.38□□□□□ -2.19
SEC3YER008C FEN2P25621 512 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C CMK1P27466 446 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C ARP2P32381 391 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C RPS0AP32905 252 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C STB6P36085 766 aa1.38□□□□□ -2.19
SEC3YER008C MIP6P38760 659 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C YJL206CP39529 758 aa1.38□□□□□ -2.19
SEC3YER008C RFX1P48743 811 aa1.38□□□□□ -2.19
SEC3YER008C MRPS35P53292 345 aa1.38□□□□□ -2.19
SEC3YER008C BNI5P53890 448 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C REG1Q00816 1014 aa1.38□□□□□ -2.19
SEC3YER008C MUK1Q02866 612 aa1.38□□□□□ -2.19
SEC3YER008C YDR131CQ03899 556 aa1.38□□□□□ -2.19
SEC3YER008C RLP24Q07915 199 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C ENB1Q08299 606 aa1.38□□□□□ -2.19
SEC3YER008C GPR1Q12361 961 aa1.38□□□□□ -2.19
SEC3YER008C POM34Q12445 299 aa1.38□□□□□ -2.19
SEC3YER008C MTF2P10849 440 aa1.38□□□□□ -2.19
SEC3YER008C CAP1P28495 268 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C PRE2P30656 287 aaKnown RBP1.38□□□□□ -2.19
SEC3YER008C PET127P32606 800 aa1.38□□□□□ -2.19
SEC3YER008C PHO11P35842 467 aa1.38□□□□□ -2.19
SEC3YER008C PHO12P38693 467 aa1.38□□□□□ -2.19
SEC3YER008C CAJ1P39101 391 aa1.38□□□□□ -2.19
SEC3YER008C CHA4P43634 648 aa1.38□□□□□ -2.19
SEC3YER008C STB4P50104 949 aa1.38□□□□□ -2.19
SEC3YER008C ZDS2P54786 942 aa1.38□□□□□ -2.19
SEC3YER008C FMP45Q07651 309 aa1.38□□□□□ -2.19
SEC3YER008C PPR1P07272 904 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C MTC7P32633 139 aa1.37□□□□□ -2.19
SEC3YER008C CTF13P35203 478 aa1.37□□□□□ -2.19
SEC3YER008C GND1P38720 489 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C YHR097CP38809 366 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C RTS1P38903 757 aa1.37□□□□□ -2.19
SEC3YER008C NUP60P39705 539 aa1.37□□□□□ -2.19
SEC3YER008C PMT6P42934 759 aa1.37□□□□□ -2.19
SEC3YER008C POL31P46957 487 aa1.37□□□□□ -2.19
SEC3YER008C YJL163CP46996 555 aa1.37□□□□□ -2.19
SEC3YER008C MPS3P47069 682 aa1.37□□□□□ -2.19
SEC3YER008C YGR151CP53287 111 aa1.37□□□□□ -2.19
SEC3YER008C YNR068CP53754 272 aa1.37□□□□□ -2.19
SEC3YER008C ARG5,6Q01217 863 aa1.37□□□□□ -2.19
SEC3YER008C ARX1Q03862 593 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C ARP9Q05123 467 aa1.37□□□□□ -2.19
SEC3YER008C YSH1Q06224 779 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C YLR040CQ07988 224 aa1.37□□□□□ -2.19
SEC3YER008C SMF3Q12078 473 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C REX3Q12090 404 aa1.37□□□□□ -2.19
SEC3YER008C ILV2P07342 687 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C MRP7P12687 371 aa1.37□□□□□ -2.19
SEC3YER008C TUP1P16649 713 aa1.37□□□□□ -2.19
SEC3YER008C OLE1P21147 510 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C TRX1P22217 103 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C PEP3P27801 918 aa1.37□□□□□ -2.19
SEC3YER008C PMI40P29952 429 aaKnown RBP1.37□□□□□ -2.19
SEC3YER008C MF(ALPHA)2P32435 120 aa1.37□□□□□ -2.19
SEC3YER008C STE14P32584 239 aa1.37□□□□□ -2.19
SEC3YER008C BCS1P32839 456 aa1.37□□□□□ -2.19
SEC3YER008C CNS1P33313 385 aa1.37□□□□□ -2.19
SEC3YER008C PXA2P34230 853 aa1.37□□□□□ -2.19
SEC3YER008C PEX5P35056 612 aa1.37□□□□□ -2.19
SEC3YER008C KTR3P38130 404 aaPredicted RBP1.37□□□□□ -2.19
SEC3YER008C THI2P38141 450 aa1.37□□□□□ -2.19
SEC3YER008C TDP1P38319 544 aa1.37□□□□□ -2.19
SEC3YER008C SIC1P38634 284 aa1.37□□□□□ -2.19
SEC3YER008C MUP3P38734 546 aa1.37□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms