RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W CDC14Q00684 551 aa1.73□□□□□ -2.13
CFT1YDR301W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
CFT1YDR301W VPS16Q03308 798 aa1.73□□□□□ -2.13
CFT1YDR301W CDC123Q05791 360 aa1.73□□□□□ -2.13
CFT1YDR301W MCP2Q06567 569 aa1.73□□□□□ -2.13
CFT1YDR301W OCA6Q12454 224 aa1.73□□□□□ -2.13
CFT1YDR301W AI5_ALPHAQ9ZZX1 630 aa1.73□□□□□ -2.13
CFT1YDR301W RAD1P06777 1100 aa1.73□□□□□ -2.13
CFT1YDR301W CDC24P11433 854 aaPredicted RBP1.73□□□□□ -2.13
CFT1YDR301W MNE1P24720 663 aa1.73□□□□□ -2.13
CFT1YDR301W URA7P28274 579 aaKnown RBP1.73□□□□□ -2.13
CFT1YDR301W GPI10P30777 616 aa1.73□□□□□ -2.13
CFT1YDR301W DAL1P32375 460 aa1.73□□□□□ -2.13
CFT1YDR301W ECM32P32644 1121 aaKnown RBP1.73□□□□□ -2.13
CFT1YDR301W SEC6P32844 805 aa1.73□□□□□ -2.13
CFT1YDR301W CTF13P35203 478 aa1.73□□□□□ -2.13
CFT1YDR301W MRPL37P36532 105 aa1.73□□□□□ -2.13
CFT1YDR301W OTU2P38747 307 aaKnown RBP1.73□□□□□ -2.13
CFT1YDR301W YJR061WP40355 935 aa1.73□□□□□ -2.13
CFT1YDR301W FAF1P40546 346 aaPredicted RBP1.73□□□□□ -2.13
CFT1YDR301W MRPS18P42847 217 aa1.73□□□□□ -2.13
CFT1YDR301W RPS10BP46784 105 aaKnown RBP1.73□□□□□ -2.13
CFT1YDR301W SIP4P46954 829 aa1.73□□□□□ -2.13
CFT1YDR301W NAS6P50086 228 aa1.73□□□□□ -2.13
CFT1YDR301W TPO2P53283 614 aa1.73□□□□□ -2.13
CFT1YDR301W SIW14P53965 281 aa1.73□□□□□ -2.13
CFT1YDR301W RSC4Q02206 625 aa1.73□□□□□ -2.13
CFT1YDR301W PML39Q03760 334 aa1.73□□□□□ -2.13
CFT1YDR301W RKM2Q03942 479 aa1.73□□□□□ -2.13
CFT1YDR301W YSH1Q06224 779 aaPredicted RBP1.73□□□□□ -2.13
CFT1YDR301W SWC7Q06707 132 aa1.73□□□□□ -2.13
CFT1YDR301W LDB18Q07887 179 aa1.73□□□□□ -2.13
CFT1YDR301W NSE1Q07913 336 aa1.73□□□□□ -2.13
CFT1YDR301W RPS10AQ08745 105 aaPredicted RBP1.73□□□□□ -2.13
CFT1YDR301W YLR125WQ12138 136 aa1.73□□□□□ -2.13
CFT1YDR301W KCS1Q12494 1050 aa1.73□□□□□ -2.13
CFT1YDR301W YLR149CQ99296 730 aa1.73□□□□□ -2.13
CFT1YDR301W CCH1P50077 2039 aa1.73□□□□□ -2.13
CFT1YDR301W HIS1P00498 297 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W KEX2P13134 814 aa1.72□□□□□ -2.13
CFT1YDR301W CLN1P20437 546 aa1.72□□□□□ -2.13
CFT1YDR301W MRPL25P23369 157 aa1.72□□□□□ -2.13
CFT1YDR301W PRE9P23638 258 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W PEX34P25584 144 aa1.72□□□□□ -2.13
CFT1YDR301W IMG2P25642 146 aaPredicted RBP1.72□□□□□ -2.13
CFT1YDR301W URA10P30402 227 aa1.72□□□□□ -2.13
CFT1YDR301W NUD1P32336 851 aa1.72□□□□□ -2.13
CFT1YDR301W AEP1P32493 518 aa1.72□□□□□ -2.13
CFT1YDR301W SWE1P32944 819 aa1.72□□□□□ -2.13
CFT1YDR301W PEX5P35056 612 aa1.72□□□□□ -2.13
CFT1YDR301W LRG1P35688 1017 aa1.72□□□□□ -2.13
CFT1YDR301W CBR1P38626 284 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W SOH1P38633 127 aa1.72□□□□□ -2.13
CFT1YDR301W GND1P38720 489 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W RAD26P40352 1085 aa1.72□□□□□ -2.13
CFT1YDR301W YIR007WP40566 764 aa1.72□□□□□ -2.13
CFT1YDR301W UFE1P41834 346 aa1.72□□□□□ -2.13
CFT1YDR301W ACS2P52910 683 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W COG1P53079 417 aa1.72□□□□□ -2.13
CFT1YDR301W COG6P53959 839 aa1.72□□□□□ -2.13
CFT1YDR301W YMR206WQ03695 313 aa1.72□□□□□ -2.13
CFT1YDR301W YDR132CQ03900 495 aa1.72□□□□□ -2.13
CFT1YDR301W SPG3Q04398 127 aaPredicted RBP1.72□□□□□ -2.13
CFT1YDR301W YIG1Q08956 461 aa1.72□□□□□ -2.13
CFT1YDR301W PGC1Q08959 321 aa1.72□□□□□ -2.13
CFT1YDR301W YOR012WQ12351 137 aa1.72□□□□□ -2.13
CFT1YDR301W STB3Q12427 513 aa1.72□□□□□ -2.13
CFT1YDR301W MSB2P32334 1306 aa1.72□□□□□ -2.13
CFT1YDR301W INH1P01097 85 aa1.72□□□□□ -2.13
CFT1YDR301W SWI5P08153 709 aa1.72□□□□□ -2.13
CFT1YDR301W GAL11P19659 1081 aa1.72□□□□□ -2.13
CFT1YDR301W VAC17P25591 423 aa1.72□□□□□ -2.13
CFT1YDR301W GYP6P32806 458 aa1.72□□□□□ -2.13
CFT1YDR301W PMT1P33775 817 aa1.72□□□□□ -2.13
CFT1YDR301W ADD66P36040 267 aa1.72□□□□□ -2.13
CFT1YDR301W STB6P36085 766 aa1.72□□□□□ -2.13
CFT1YDR301W SAP30P38429 201 aa1.72□□□□□ -2.13
CFT1YDR301W SRP72P38688 640 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W DBP8P38719 431 aa1.72□□□□□ -2.13
CFT1YDR301W HAT2P39984 401 aa1.72□□□□□ -2.13
CFT1YDR301W OSW5P40219 148 aa1.72□□□□□ -2.13
CFT1YDR301W HOS4P40480 1083 aa1.72□□□□□ -2.13
CFT1YDR301W BST1P43571 1029 aa1.72□□□□□ -2.13
CFT1YDR301W PRP24P49960 444 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W PAN2P53010 1115 aaPredicted RBP1.72□□□□□ -2.13
CFT1YDR301W ROM1P53046 1155 aa1.72□□□□□ -2.13
CFT1YDR301W RNH70P53331 553 aa1.72□□□□□ -2.13
CFT1YDR301W NRD1P53617 575 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
CFT1YDR301W EFM6P53970 246 aa1.72□□□□□ -2.13
CFT1YDR301W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
CFT1YDR301W NUP100Q02629 959 aa1.72□□□□□ -2.13
CFT1YDR301W GCN5Q03330 439 aa1.72□□□□□ -2.13
CFT1YDR301W SRO7Q12038 1033 aa1.72□□□□□ -2.13
CFT1YDR301W HIP1P06775 603 aa1.72□□□□□ -2.13
CFT1YDR301W PHO4P07270 312 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W APA1P16550 321 aaKnown RBP1.72□□□□□ -2.13
CFT1YDR301W BET2P20133 325 aa1.72□□□□□ -2.13
CFT1YDR301W RAM1P22007 431 aa1.72□□□□□ -2.13
CFT1YDR301W ATP12P22135 325 aa1.72□□□□□ -2.13
CFT1YDR301W YSP3P25036 478 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms