RNA–Protein interactions for RNA: YAL058W

CNE1, Transcript of Calnexin, yeastyeast

Gene CNE1, Length 1,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CNE1YAL058W DSE1P40077 573 aa6.11□□□□□ -1.43
CNE1YAL058W HPM1P40481 377 aa6.11□□□□□ -1.43
CNE1YAL058W NOP9P47077 666 aaKnown RBP6.11□□□□□ -1.43
CNE1YAL058W TUB4P53378 473 aa6.11□□□□□ -1.43
CNE1YAL058W SPC98P53540 846 aa6.11□□□□□ -1.43
CNE1YAL058W RKM2Q03942 479 aa6.11□□□□□ -1.43
CNE1YAL058W YML083CQ04526 418 aa6.11□□□□□ -1.43
CNE1YAL058W YLR257WQ06146 321 aaKnown RBP6.11□□□□□ -1.43
CNE1YAL058W NSE1Q07913 336 aa6.11□□□□□ -1.43
CNE1YAL058W DIS3Q08162 1001 aaKnown RBP6.11□□□□□ -1.43
CNE1YAL058W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
CNE1YAL058W VPS54Q12071 889 aa6.11□□□□□ -1.43
CNE1YAL058W YPR027CQ12079 277 aa6.11□□□□□ -1.43
CNE1YAL058W SGT2Q12118 346 aaKnown RBP6.11□□□□□ -1.43
CNE1YAL058W KCS1Q12494 1050 aa6.11□□□□□ -1.43
CNE1YAL058W YMR030W-AQ3E760 96 aa6.11□□□□□ -1.43
CNE1YAL058W RGS2Q99188 309 aa6.11□□□□□ -1.43
CNE1YAL058W IZH4Q99393 312 aa6.11□□□□□ -1.43
CNE1YAL058W HAP2P06774 265 aa6.1□□□□□ -1.43
CNE1YAL058W ERR1P0CX10 437 aa6.1□□□□□ -1.43
CNE1YAL058W ERR2P0CX11 437 aa6.1□□□□□ -1.43
CNE1YAL058W VPS3P23643 1011 aa6.1□□□□□ -1.43
CNE1YAL058W CCR4P31384 837 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W HEM12P32347 362 aaPredicted RBP6.1□□□□□ -1.43
CNE1YAL058W VPH1P32563 840 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W KES1P35844 434 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W KDX1P36005 433 aa6.1□□□□□ -1.43
CNE1YAL058W YMC2P38087 329 aa6.1□□□□□ -1.43
CNE1YAL058W NMD3P38861 518 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W SEC31P38968 1273 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W NPT1P39683 429 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W PAC1P39946 494 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W ERR3P42222 437 aa6.1□□□□□ -1.43
CNE1YAL058W RRT5P43607 289 aa6.1□□□□□ -1.43
CNE1YAL058W ARC1P46672 376 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W SET2P46995 733 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W CCT8P47079 568 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W ALT1P52893 592 aa6.1□□□□□ -1.43
CNE1YAL058W YGR283CP53336 341 aaPredicted RBP6.1□□□□□ -1.43
CNE1YAL058W NOP13P53883 403 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
CNE1YAL058W YNL108CP53929 270 aa6.1□□□□□ -1.43
CNE1YAL058W INP2Q03824 705 aa6.1□□□□□ -1.43
CNE1YAL058W AGE1Q04412 482 aa6.1□□□□□ -1.43
CNE1YAL058W ATG17Q06410 417 aa6.1□□□□□ -1.43
CNE1YAL058W MRI1Q06489 411 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W DBP10Q12389 995 aaKnown RBP6.1□□□□□ -1.43
CNE1YAL058W ADF1Q2V2Q1 113 aa6.1□□□□□ -1.43
CNE1YAL058W VPS5Q92331 675 aa6.1□□□□□ -1.43
CNE1YAL058W AI5_ALPHAQ9ZZX1 630 aa6.1□□□□□ -1.43
CNE1YAL058W YPR089WO13585 888 aa6.09□□□□□ -1.43
CNE1YAL058W GAL80P04387 435 aa6.09□□□□□ -1.43
CNE1YAL058W ATP1P07251 545 aaKnown RBP6.09□□□□□ -1.43
CNE1YAL058W ZIP1P31111 875 aa6.09□□□□□ -1.43
CNE1YAL058W TFC1P32367 649 aa6.09□□□□□ -1.43
CNE1YAL058W PHA2P32452 334 aa6.09□□□□□ -1.43
CNE1YAL058W UTR2P32623 467 aa6.09□□□□□ -1.43
CNE1YAL058W AIM26P32858 118 aa6.09□□□□□ -1.43
CNE1YAL058W NOP4P37838 685 aaKnown RBP6.09□□□□□ -1.43
CNE1YAL058W HMT1P38074 348 aa6.09□□□□□ -1.43
CNE1YAL058W RDH54P38086 958 aa6.09□□□□□ -1.43
CNE1YAL058W TBS1P38114 1094 aa6.09□□□□□ -1.43
CNE1YAL058W HSL7P38274 827 aa6.09□□□□□ -1.43
CNE1YAL058W YIR016WP40572 265 aa6.09□□□□□ -1.43
CNE1YAL058W MND2P40577 368 aa6.09□□□□□ -1.43
CNE1YAL058W STB4P50104 949 aa6.09□□□□□ -1.43
CNE1YAL058W TEL2P53038 688 aa6.09□□□□□ -1.43
CNE1YAL058W ATF2P53296 535 aa6.09□□□□□ -1.43
CNE1YAL058W YPR003CP53394 754 aa6.09□□□□□ -1.43
CNE1YAL058W PRO2P54885 456 aaKnown RBP6.09□□□□□ -1.43
CNE1YAL058W RPL34AP87262 121 aaPredicted RBP6.09□□□□□ -1.43
CNE1YAL058W STP1Q00947 519 aa6.09□□□□□ -1.43
CNE1YAL058W SLU7Q02775 382 aaKnown RBP6.09□□□□□ -1.43
CNE1YAL058W INA17Q02888 182 aa6.09□□□□□ -1.43
CNE1YAL058W SNU56Q03782 492 aaKnown RBP6.09□□□□□ -1.43
CNE1YAL058W YDR179W-AQ03983 463 aa6.09□□□□□ -1.43
CNE1YAL058W ATG26Q06321 1198 aa6.09□□□□□ -1.43
CNE1YAL058W CDD1Q06549 142 aa6.09□□□□□ -1.43
CNE1YAL058W ENT4Q07872 247 aa6.09□□□□□ -1.43
CNE1YAL058W MCH5Q08777 521 aa6.09□□□□□ -1.43
CNE1YAL058W THI21Q08975 551 aa6.09□□□□□ -1.43
CNE1YAL058W DAP1Q12091 152 aa6.09□□□□□ -1.43
CNE1YAL058W RRP36Q12481 300 aaPredicted RBP6.09□□□□□ -1.43
CNE1YAL058W CTF3Q12748 733 aa6.09□□□□□ -1.43
CNE1YAL058W PAB1P04147 577 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44 RIP-Chip
CNE1YAL058W SUI3P09064 285 aaKnown RBP6.09□□□□□ -1.44
CNE1YAL058W ATR1P13090 542 aa6.09□□□□□ -1.44
CNE1YAL058W GCY1P14065 312 aaKnown RBP RIP-Chip data6.09□□□□□ -1.44not detected
CNE1YAL058W GDA1P32621 518 aa6.09□□□□□ -1.44
CNE1YAL058W NPL6P32832 435 aa6.09□□□□□ -1.44
CNE1YAL058W GCS1P35197 352 aa6.09□□□□□ -1.44
CNE1YAL058W AGP2P38090 596 aa6.09□□□□□ -1.44
CNE1YAL058W AMN1P38285 549 aaPredicted RBP6.09□□□□□ -1.44
CNE1YAL058W AIM20P40451 204 aa6.09□□□□□ -1.44
CNE1YAL058W AIR1P40507 360 aaKnown RBP6.09□□□□□ -1.44
CNE1YAL058W FMP32P43557 207 aa6.09□□□□□ -1.44
CNE1YAL058W BNA3P47039 444 aaKnown RBP6.09□□□□□ -1.44
CNE1YAL058W ASN2P49090 572 aaKnown RBP6.09□□□□□ -1.44
CNE1YAL058W YGL108CP53139 140 aa6.09□□□□□ -1.44
CNE1YAL058W BUD32P53323 261 aa6.09□□□□□ -1.44
CNE1YAL058W SKI8Q02793 397 aaPredicted RBP6.09□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms