RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 RTEL1Q9NZ71 1219 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 MYO3BQ8WXR4 1341 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 GOLGB1Q14789 3259 aaKnown RBP19.03■□□□□ 0.64
PHGDH-216ENST00000641375 U2AF2P26368 475 aaKnown RBP eCLIP19.03■□□□□ 0.644e-10■■□□□ 11.5
PHGDH-216ENST00000641375 RBM5P52756 815 aaKnown RBP eCLIP19.03■□□□□ 0.64
PHGDH-216ENST00000641375 CEBPZQ03701 1054 aaKnown RBP19.03■□□□□ 0.64
PHGDH-216ENST00000641375 FUT2Q10981 343 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 TPRNQ4KMQ1 711 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 DDX4Q9NQI0 724 aaKnown RBP19.03■□□□□ 0.64
PHGDH-216ENST00000641375 SWAP70Q9UH65 585 aa19.03■□□□□ 0.64
PHGDH-216ENST00000641375 KIF28PB7ZC32 967 aa19.02■□□□□ 0.64
PHGDH-216ENST00000641375 MMP1P03956 469 aa19.02■□□□□ 0.64
PHGDH-216ENST00000641375 HLA-DOAP06340 250 aa19.02■□□□□ 0.64
PHGDH-216ENST00000641375 GUCY1A2P33402 732 aa19.02■□□□□ 0.64
PHGDH-216ENST00000641375 YDJCA8MPS7 323 aa19.02■□□□□ 0.63
PHGDH-216ENST00000641375 GABPAQ06546 454 aa19.02■□□□□ 0.63
PHGDH-216ENST00000641375 SERPINB13Q9UIV8 391 aa19.02■□□□□ 0.63
PHGDH-216ENST00000641375 STX8Q9UNK0 236 aa19.02■□□□□ 0.63
PHGDH-216ENST00000641375 UBE2Q2LH0YL09 131 aa19.01■□□□□ 0.63
PHGDH-216ENST00000641375 PLEKHA8P1O95397 391 aa19.01■□□□□ 0.63
PHGDH-216ENST00000641375 YEATS4O95619 227 aa19.01■□□□□ 0.63
PHGDH-216ENST00000641375 LARGE2Q8N3Y3 721 aa19.01■□□□□ 0.63
PHGDH-216ENST00000641375 PGBD1Q96JS3 809 aa19.01■□□□□ 0.63
PHGDH-216ENST00000641375 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
PHGDH-216ENST00000641375 NPM3O75607 178 aaKnown RBP19■□□□□ 0.63
PHGDH-216ENST00000641375 GNAQP50148 359 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 BICD2Q8TD16 824 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 IDI2Q9BXS1 227 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 DHX36Q9H2U1 1008 aaKnown RBP19■□□□□ 0.63
PHGDH-216ENST00000641375 PLIN4Q96Q06 1357 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 XRCC6P12956 609 aaKnown RBP eCLIP19■□□□□ 0.635e-6■■□□□ 11.5
PHGDH-216ENST00000641375 NASPP49321 788 aaPredicted RBP19■□□□□ 0.63
PHGDH-216ENST00000641375 KCNG4Q8TDN1 519 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 FTOQ9C0B1 505 aaKnown RBP eCLIP19■□□□□ 0.63
PHGDH-216ENST00000641375 FOXP1Q9H334 677 aaPredicted RBP19■□□□□ 0.63
PHGDH-216ENST00000641375 TAOK2Q9UL54 1235 aa19■□□□□ 0.63
PHGDH-216ENST00000641375 V9GY48 417 aaPredicted RBP19■□□□□ 0.63
PHGDH-216ENST00000641375 BRCA1P38398 1863 aaKnown RBP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 TMEM47Q9BQJ4 181 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 EHD4Q9H223 541 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 GRM4Q14833 912 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 STK38Q15208 465 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 PKN1Q16512 942 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 DALRD3Q5D0E6 543 aaKnown RBP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 NOSTRINQ8IVI9 506 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 LINC00301Q8NCQ3 95 aa18.99■□□□□ 0.63
PHGDH-216ENST00000641375 ZNF277Q9NRM2 450 aaPredicted RBP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 DDX19AQ9NUU7 478 aaKnown RBP18.99■□□□□ 0.63
PHGDH-216ENST00000641375 ME1P48163 572 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 NFIAQ12857 509 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 RSBN1LQ6PCB5 846 aaPredicted RBP18.98■□□□□ 0.63
PHGDH-216ENST00000641375 DIS3L2Q8IYB7 885 aaKnown RBP18.98■□□□□ 0.63
PHGDH-216ENST00000641375 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
PHGDH-216ENST00000641375 NOVP48745 357 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 SF3A1Q15459 793 aaKnown RBP18.98■□□□□ 0.63
PHGDH-216ENST00000641375 ZMYND15Q9H091 742 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 CLIC4Q9Y696 253 aa18.98■□□□□ 0.63
PHGDH-216ENST00000641375 VIL1P09327 827 aaKnown RBP18.97■□□□□ 0.63
PHGDH-216ENST00000641375 LIG1P18858 919 aa18.97■□□□□ 0.63
PHGDH-216ENST00000641375 CEP95Q96GE4 821 aa18.97■□□□□ 0.63
PHGDH-216ENST00000641375 LZTS2Q9BRK4 669 aa18.97■□□□□ 0.63
PHGDH-216ENST00000641375 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
PHGDH-216ENST00000641375 BTBD18B2RXH4 712 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 CFAP100Q494V2 611 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 ADALQ6DHV7 355 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 NIM1KQ8IY84 436 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 MAD2L2Q9UI95 211 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 HDAC9Q9UKV0 1011 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 FER1L6Q2WGJ9 1857 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 SPTLC2O15270 562 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 R3HDM1Q15032 1099 aaKnown RBP18.96■□□□□ 0.63
PHGDH-216ENST00000641375 PHF20Q9BVI0 1012 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 TSPY26PQ9H489 355 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 BRMS1Q9HCU9 246 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 DACT1Q9NYF0 836 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 PI4KBQ9UBF8 816 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 ZNRF3Q9ULT6 936 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 PCDHAC2Q9Y5I4 1007 aa18.96■□□□□ 0.63
PHGDH-216ENST00000641375 SCG2P13521 617 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 PPP4R3BQ5MIZ7 849 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 OGFOD1Q8N543 542 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 FAM198AQ9UFP1 575 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 A0A1W2PQ27 194 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 A0A1W2PQ64 194 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 A0A1W2PQD8 194 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 PSMD14O00487 310 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 RAD17O75943 681 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 SLC39A14Q15043 492 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 PFKFB3Q16875 520 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-216ENST00000641375 RILPL1Q5EBL4 403 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 JMYQ8N9B5 988 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 CCDC17Q96LX7 622 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 MTMR4Q9NYA4 1195 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 VPS54Q9P1Q0 977 aa18.95■□□□□ 0.62
PHGDH-216ENST00000641375 PCDHA7Q9UN72 937 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms