RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 RASGRF1Q13972 1273 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 ARMCX5Q6P1M9 558 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 NBPF5PQ86XG9 351 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 PGBD1Q96JS3 809 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 SH2B1Q9NRF2 756 aaPredicted RBP13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
RBFOX1-224ENST00000641259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 HSPD1P10809 573 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 HELLSQ9NRZ9 838 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 IGHMBP2P38935 993 aaKnown RBP13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 FANCCQ00597 558 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 CHST3Q7LGC8 479 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 DOCK2Q92608 1830 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 NDUFAB1O14561 156 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 KLRK1P26718 216 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 RFC4P35249 363 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 NFIXQ14938 502 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 REXO1L1PQ8IX06 675 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 ZNF512BQ96KM6 892 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 CD248Q9HCU0 757 aa13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 COL1A1P02452 1464 aaPredicted RBP13.44□□□□□ -0.26
RBFOX1-224ENST00000641259 TCHHQ07283 1943 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 RNF40O75150 1001 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 PSMA5P28066 241 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 SATB1Q01826 763 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 SLC10A5Q5PT55 438 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 WWC3Q9ULE0 1092 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 TM4SF1P30408 202 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 EFCAB13Q8IY85 973 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 TMEM87AQ8NBN3 555 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 TM6SF1Q9BZW5 370 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 A0A087WUV0 522 aaPredicted RBP13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 GPIHBP1Q8IV16 184 aa13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 GSPT2Q8IYD1 628 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 MKRN1Q9UHC7 482 aaKnown RBP13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
RBFOX1-224ENST00000641259 TOB2Q14106 344 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 MAP9Q49MG5 647 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 RNF217Q8TC41 542 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 BAG1Q99933 345 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CPSF2Q9P2I0 782 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 ODF2LQ9ULJ1 636 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 PPP2R2CQ9Y2T4 447 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CTAGE15A4D2H0 777 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 MYO1FO00160 1098 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CTAGE8P0CG41 777 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 PAX7P23759 505 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 TSGA10IPQ3SY00 556 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CTAGE6Q86UF2 777 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CTAGE4Q8IX94 777 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 MINPP1Q9UNW1 487 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 FAM169AQ9Y6X4 670 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 HNRNPH1P31943 449 aaKnown RBP13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 CTCFLQ8NI51 663 aaPredicted RBP13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 VEZTQ9HBM0 779 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 DONSONQ9NYP3 566 aa13.42□□□□□ -0.26
RBFOX1-224ENST00000641259 SLC5A1P13866 664 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 RPS6KB1P23443 525 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 GYG1P46976 350 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 NAP1L1P55209 391 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 PIK3R5Q8WYR1 880 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 EHD4Q9H223 541 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 TCRBV5S4A2TA0A5A2 114 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 RGL2O15211 777 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 IDH1O75874 414 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 GYS1P13807 737 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 ADD2P35612 726 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 TXLNAP40222 546 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 SLC9C2Q5TAH2 1124 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 NKX2-3Q8TAU0 364 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 FUT8Q9BYC5 575 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 NCOA5Q9HCD5 579 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 BCCIPQ9P287 314 aaKnown RBP eCLIP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 CASP8Q14790 479 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 TBC1D31Q96DN5 1066 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 CDC5LQ99459 802 aaKnown RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 DSCC1Q9BVC3 393 aa13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
RBFOX1-224ENST00000641259 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 CPLX1O14810 134 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 ZRANB2O95218 330 aaKnown RBP eCLIP13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 CORO7P57737 925 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 KCTD16Q68DU8 428 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 LRRC31Q6UY01 552 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 FAM76AQ8TAV0 307 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 ZNF396Q96N95 335 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 FANCLQ9NW38 375 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 PPP1R12BO60237 982 aaPredicted RBP13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 GNGT1P63211 74 aa13.4□□□□□ -0.26
RBFOX1-224ENST00000641259 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms