RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, human

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNQ3-208	ENST00000639496	FAM193B	Q96PV7	902 aa	Predicted RBP	11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	DDX23	Q9BUQ8	820 aa	Known RBP	11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ZMYND15	Q9H091	742 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PDE6A	P16499	860 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	TNNI1	P19237	187 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	KMT5B	Q4FZB7	885 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	DPP9	Q86TI2	863 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	NCAPG2	Q86XI2	1143 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	IL17RE	Q8NFR9	667 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	IPO4	Q8TEX9	1081 aa	Known RBP	11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CCT6B	Q92526	530 aa		11.43	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GIPC1	O14908	333 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	BTD	P43251	543 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CHRND	Q07001	517 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CCDC25	Q86WR0	208 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	UBL4B	Q8N7F7	174 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	RNF169	Q8NCN4	708 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PNMA1	Q8ND90	353 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	LARS	Q9P2J5	1176 aa	Known RBP	11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CCDC6	Q16204	474 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ASIC2	Q16515	512 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GSDMB	Q8TAX9	411 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	MYL10	Q9BUA6	226 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CTNND2	Q9UQB3	1225 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	SNX14	Q9Y5W7	946 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PPEF1	O14829	653 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ABCB5	Q2M3G0	1257 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ZNF569	Q5MCW4	686 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	SLFN13	Q68D06	897 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GALNT17	Q6IS24	598 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ARMC9	Q7Z3E5	817 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	TBC1D31	Q96DN5	1066 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	TM6SF1	Q9BZW5	370 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	LZTFL1	Q9NQ48	299 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	NRBP2	Q9NSY0	501 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	NPHP4	O75161	1426 aa	Predicted RBP	11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ACTN4	O43707	911 aa	Known RBP	11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	USP14	P54578	494 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CLUL1	Q15846	466 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CCDC93	Q567U6	631 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	IGSF22	Q8N9C0	903 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PHKB	Q93100	1093 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	VPS16	Q9H269	839 aa		11.42	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PDE8B	O95263	885 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ATF7	P17544	494 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CFAP157	Q5JU67	520 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	EP400NL	Q6ZTU2	488 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ARHGEF25	Q86VW2	580 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	JPH2	Q9BR39	696 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	TLDC2	A0PJX2	215 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	RRP9	O43818	475 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PSMC4	P43686	418 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	YARS	P54577	528 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	DYM	Q7RTS9	669 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	RSPH3	Q86UC2	560 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	IFNL3	Q8IZI9	196 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GOLGA5	Q8TBA6	731 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	TRIM7	Q9C029	511 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	KDR	P35968	1356 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	WDR17	Q8IZU2	1322 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	KLRF2	D3W0D1	207 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	BCAM	P50895	628 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ATRIP	Q8WXE1	791 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	BAG1	Q99933	345 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	NUCKS1	Q9H1E3	243 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496		E7EWF7	191 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GMNN	O75496	209 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	MCM6	Q14566	821 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GPATCH4	Q5T3I0	446 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	SLFN12	Q8IYM2	578 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	SSH3	Q8TE77	659 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	MIS12	Q9H081	205 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ADD3	Q9UEY8	706 aa	Known RBP	11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PRKAG2	Q9UGJ0	569 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	PCDHA12	Q9UN75	941 aa		11.41	□□□□□ -0.58
KCNQ3-208	ENST00000639496	OSBP	P22059	807 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	HSPA4	P34932	840 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ANKS4B	Q8N8V4	417 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CTTNBP2NL	Q9P2B4	639 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	MAPK8IP1	Q9UQF2	711 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GEN1	Q17RS7	908 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	FAM160B1	Q5W0V3	765 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	IQCD	Q96DY2	449 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	CAPZA3	Q96KX2	299 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	VPS54	Q9P1Q0	977 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	SWAP70	Q9UH65	585 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	ANAPC4	Q9UJX5	808 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	BLM	P54132	1417 aa	Predicted RBP	11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	MAST1	Q9Y2H9	1570 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	KIF24	Q5T7B8	1368 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	XPOT	O43592	962 aa	Known RBP	11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GNA14	O95837	355 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	KARS	Q15046	597 aa	Known RBP	11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	XKR9	Q5GH70	373 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	GIMAP7	Q8NHV1	300 aa		11.4	□□□□□ -0.58
KCNQ3-208	ENST00000639496	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms