RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 DAGLAQ9Y4D2 1042 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 EMILIN1Q9Y6C2 1016 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 MAPK4P31152 587 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 NEUROD2Q15784 382 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 RPUSD2Q8IZ73 545 aaKnown RBP4.73□□□□□ -1.65
CCDC7-213ENST00000639290 RNF25Q96BH1 459 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-213ENST00000639290 ZNF341Q9BYN7 854 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 NRBP1Q9UHY1 535 aa4.73□□□□□ -1.65
CCDC7-213ENST00000639290 ZNF236Q9UL36 1845 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 LOC285556D6RIA3 1793 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 REV3LO60673 3130 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 KIF28PB7ZC32 967 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 UFL1O94874 794 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 SNRPA1P09661 255 aaKnown RBP4.72□□□□□ -1.65
CCDC7-213ENST00000639290 TAP1Q03518 808 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 PTPROQ16827 1216 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 FKBP1CQ5VVH2 108 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 CYP2W1Q8TAV3 490 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 SMCR8Q8TEV9 937 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-213ENST00000639290 TBC1D2Q9BYX2 928 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 ZNF112Q9UJU3 913 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 RAI2Q9Y5P3 530 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 FANCMQ8IYD8 2048 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 XDHP47989 1333 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 LRP3O75074 770 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 PLA2G2AP14555 144 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 RBM25P49756 843 aaKnown RBP4.72□□□□□ -1.65
CCDC7-213ENST00000639290 FAAP100Q0VG06 881 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 PTPN21Q16825 1174 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 HSP90AB3PQ58FF7 597 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 ZNF710Q8N1W2 664 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.72□□□□□ -1.65
CCDC7-213ENST00000639290 PCDHGC5Q9Y5F6 944 aa4.72□□□□□ -1.65
CCDC7-213ENST00000639290 STXBP3O00186 592 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 SPTLC1O15269 473 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 IGHA2P01877 340 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 CYP2C8P10632 490 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 HSP90B1P14625 803 aaKnown RBP4.71□□□□□ -1.66
CCDC7-213ENST00000639290 GIGYF2Q6Y7W6 1299 aaKnown RBP4.71□□□□□ -1.66
CCDC7-213ENST00000639290 PDZD3Q86UT5 571 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 TMEM105Q8N8V8 129 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 MARVELD3Q96A59 401 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.71□□□□□ -1.66
CCDC7-213ENST00000639290 AGTPBP1Q9UPW5 1226 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 RIF1Q5UIP0 2472 aaKnown RBP4.71□□□□□ -1.66
CCDC7-213ENST00000639290 TRANK1O15050 2925 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 FAM205CA6NFA0 338 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 MBTPS2O43462 519 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 HOXC6P09630 235 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 ATP2A2P16615 1042 aaKnown RBP4.71□□□□□ -1.66
CCDC7-213ENST00000639290 MORN1Q5T089 497 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 SAMD11Q96NU1 681 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 ZMYND15Q9H091 742 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 SIP14410 1827 aa4.71□□□□□ -1.66
CCDC7-213ENST00000639290 PRRC2BQ5JSZ5 2229 aaKnown RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 EPOPA6NHQ4 379 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 TLR3O15455 904 aaKnown RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 LARP1BQ659C4 914 aaKnown RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 FAM83AQ86UY5 434 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 PROCA1Q8NCQ7 364 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 WRNIP1Q96S55 665 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 HINFPQ9BQA5 517 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 RSPH6AQ9H0K4 717 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 LGR6Q9HBX8 967 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 CFAP47Q6ZTR5 3102 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 GLRX3O76003 335 aaKnown RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 CA3P07451 260 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 ANGPT1Q15389 498 aa4.7□□□□□ -1.66
CCDC7-213ENST00000639290 MRPL38Q96DV4 380 aaKnown RBP4.7□□□□□ -1.66
CCDC7-213ENST00000639290 PTPRFP10586 1907 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ANKRD17O75179 2603 aaKnown RBP4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ACTN1P12814 892 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 LIMK1P53667 647 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ERVK-21P61565 698 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 GTF2IP78347 998 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ZNF200P98182 395 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ARNTL2Q8WYA1 636 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 CLMPQ9H6B4 373 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 DOCK3Q8IZD9 2030 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ADAMTS20P59510 1910 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 MOXD2PA6NHM9 499 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 J3QKU1 62 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 SEPT4O43236 478 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 EYA4O95677 639 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 CYBAP13498 195 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ATF7P17544 494 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-213ENST00000639290 CYP2B6P20813 491 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 RFC2P35250 354 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ADCYAP1R1P41586 468 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 RPS8P62241 208 aaKnown RBP4.69□□□□□ -1.66
CCDC7-213ENST00000639290 CFAP100Q494V2 611 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 OLFML2BQ68BL8 750 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 SUMF1Q8NBK3 374 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 STK24Q9Y6E0 443 aa4.69□□□□□ -1.66
CCDC7-213ENST00000639290 ELP1O95163 1332 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 C5orf42Q9H799 3197 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 RFXAPO00287 272 aa4.68□□□□□ -1.66
CCDC7-213ENST00000639290 TNNT2P45379 298 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms