RNA–Protein interactions for RNA: ENST00000638709.1

FGFR2-227, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-227ENST00000638709 USP21Q9UK80 565 aa10.01□□□□□ -0.81
FGFR2-227ENST00000638709 UBR3Q6ZT12 1888 aa10.01□□□□□ -0.81
FGFR2-227ENST00000638709 ROBO3Q96MS0 1386 aa10.01□□□□□ -0.81
FGFR2-227ENST00000638709 UBE2Q2LH0YL09 131 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 BIN1O00499 593 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 KLRK1P26718 216 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 RFC4P35249 363 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 PKN1Q16512 942 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 LONRF3Q496Y0 759 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 CT47A1Q5JQC4 288 aaPredicted RBP10□□□□□ -0.81
FGFR2-227ENST00000638709 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 FAM177A1Q8N128 213 aaPredicted RBP10□□□□□ -0.81
FGFR2-227ENST00000638709 FERMT2Q96AC1 680 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 AATFQ9NY61 560 aaKnown RBP eCLIP10□□□□□ -0.81
FGFR2-227ENST00000638709 XDHP47989 1333 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 CNTNAP5Q8WYK1 1306 aa10□□□□□ -0.81
FGFR2-227ENST00000638709 A0A087WWV3 80 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 WTIPA6NIX2 430 aaPredicted RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 KIF2AO00139 706 aaPredicted RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 NPHP1O15259 732 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 SMC2O95347 1197 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 SKILP12757 684 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PRDX5P30044 214 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 KIF5BP33176 963 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 TRAPPC10P48553 1259 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 KCNQ4P56696 695 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 MDM2Q00987 491 aaPredicted RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 NR5A1Q13285 461 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PNOCQ13519 176 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 POSTNQ15063 836 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 TRAPPC3LQ5T215 181 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 ZNF804AQ7Z570 1209 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 AMOTL1Q8IY63 956 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 MLKLQ8NB16 471 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 XPO4Q9C0E2 1151 aaKnown RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 IFNKQ9P0W0 207 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PAXBP1Q9Y5B6 917 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CDK5RAP2Q96SN8 1893 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CYP2D7A0A087X1C5 515 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 HAX1O00165 279 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 BAG3O95817 575 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 LDHBP07195 334 aaKnown RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 LDHCP07864 332 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 HMGB2P26583 209 aaKnown RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PPP4CP60510 307 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CCZ1BP86790 482 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 FANCCQ00597 558 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 FILIP1Q7Z7B0 1213 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CCDC82Q8N4S0 544 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CNBD1Q8NA66 436 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 ANKS1AQ92625 1134 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 FBXW7Q969H0 707 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PYM1Q9BRP8 204 aaKnown RBP9.99□□□□□ -0.81
FGFR2-227ENST00000638709 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PCDHB6Q9Y5E3 794 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 PCDHA5Q9Y5H7 936 aa9.99□□□□□ -0.81
FGFR2-227ENST00000638709 LRRC37AA6NMS7 1700 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 DDX60LQ5H9U9 1706 aaKnown RBP9.98□□□□□ -0.81
FGFR2-227ENST00000638709 PRDM1O75626 825 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 TUBB4AP04350 444 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 CALML3P27482 149 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 GNAQP50148 359 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 TPD52L1Q16890 204 aaPredicted RBP9.98□□□□□ -0.81
FGFR2-227ENST00000638709 GLIPR1L2Q4G1C9 344 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 C12orf60Q5U649 245 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 PTF1AQ7RTS3 328 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 DGKHQ86XP1 1220 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
FGFR2-227ENST00000638709 CERKQ8TCT0 537 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 OXER1Q8TDS5 423 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 TNFRSF25Q93038 417 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 SMARCE1Q969G3 411 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 SH3GLB2Q9NR46 395 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 VPS54Q9P1Q0 977 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
FGFR2-227ENST00000638709 V9GY48 417 aaPredicted RBP9.98□□□□□ -0.81
FGFR2-227ENST00000638709 TSPY2A6NKD2 308 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 POLR2DO15514 142 aaKnown RBP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 CCP110O43303 1012 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 ACTN4O43707 911 aaKnown RBP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 SCG2P13521 617 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 TNNT1P13805 278 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 SFPQP23246 707 aaKnown RBP eCLIP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 SARSP49591 514 aaKnown RBP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 NFIXQ14938 502 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 SYCP1Q15431 976 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 PFKFB3Q16875 520 aaPredicted RBP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 TMC6Q7Z403 805 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 CCDC112Q8NEF3 446 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 SPATA20Q8TB22 786 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 ZNF287Q9HBT7 754 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 TCP11L1Q9NUJ3 509 aa9.97□□□□□ -0.81
FGFR2-227ENST00000638709 MKRN1Q9UHC7 482 aaKnown RBP9.97□□□□□ -0.81
FGFR2-227ENST00000638709 MAN1B1Q9UKM7 699 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms