RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 ANO2Q9NQ90 1003 aa10.89□□□□□ -0.67
CACNA1A-239ENST00000637297 RNF186Q9NXI6 227 aa10.89□□□□□ -0.67
CACNA1A-239ENST00000637297 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
CACNA1A-239ENST00000637297 U3KPZ7 1027 aaPredicted RBP10.89□□□□□ -0.67
CACNA1A-239ENST00000637297 MYH4Q9Y623 1939 aa10.89□□□□□ -0.67
CACNA1A-239ENST00000637297 A0A0G2JLL6 359 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 TESPA1A2RU30 521 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 RANBP6O60518 1105 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 PCP11498 1178 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 RASA1P20936 1047 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 USP14P54578 494 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 HMGCS2P54868 508 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 BACE1P56817 501 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 TFAP4Q01664 338 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 PTH1RQ03431 593 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 ICA1Q05084 483 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 PABPC4Q13310 644 aaKnown RBP eCLIP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 MTMR2Q13614 643 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 TAF1CQ15572 869 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 ZYXQ15942 572 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 SHROOM1Q2M3G4 852 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 PRRT2Q7Z6L0 340 aaPredicted RBP10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 BRI3BPQ8WY22 251 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 C22orf23Q9BZE7 217 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 SH2D4AQ9H788 454 aa10.88□□□□□ -0.67
CACNA1A-239ENST00000637297 LAMA4Q16363 1823 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 BTBD19C9JJ37 291 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 RAD21O60216 631 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 TBC1D8O95759 1140 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 TRDNQ13061 729 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 FAM47AQ5JRC9 791 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 ANKRD23Q86SG2 305 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 PROCA1Q8NCQ7 364 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 STAG1Q8WVM7 1258 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 PTPN18Q99952 460 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 INCENPQ9NQS7 918 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 SAGE1Q9NXZ1 904 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 TSKSQ9UJT2 592 aa10.87□□□□□ -0.67
CACNA1A-239ENST00000637297 PDHXO00330 501 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 ORC4O43929 436 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 OSBPP22059 807 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 GUCY1A2P33402 732 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 BECN1Q14457 450 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 SH3D19Q5HYK7 790 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 FAM43AQ8N2R8 423 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 NEDD1Q8NHV4 660 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 ACER1Q8TDN7 264 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 ESR2Q92731 530 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 MAP4K1Q92918 833 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 KRT23Q9C075 422 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 ZCCHC17Q9NP64 241 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 AGTPBP1Q9UPW5 1226 aa10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
CACNA1A-239ENST00000637297 CASP8AP2Q9UKL3 1982 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 FOXN1O15353 648 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 REC8O95072 547 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 TTLL1O95922 423 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 NT5C2P49902 561 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 RNF20Q5VTR2 975 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 IQCA1Q86XH1 822 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 PARK7Q99497 189 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 LSG1Q9H089 658 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 KIAA1683Q9H0B3 1180 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 GOPCQ9HD26 462 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 NYAP2Q9P242 653 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 CLIP2Q9UDT6 1046 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 STX8Q9UNK0 236 aa10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
CACNA1A-239ENST00000637297 CYP21A2P08686 494 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 FGRP09769 529 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 LBX1P52954 281 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 IRX3P78415 501 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 CRHR2Q13324 411 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 DGKZQ13574 1117 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 CCDC178Q5BJE1 867 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 RALYLQ86SE5 291 aaKnown RBP10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 CLEC10AQ8IUN9 316 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 TBC1D10CQ8IV04 446 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 SMCR8Q8TEV9 937 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 EMILIN3Q9NT22 766 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 MTMR4Q9NYA4 1195 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 SLC45A1Q9Y2W3 748 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 TMX2Q9Y320 296 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 LOC285556D6RIA3 1793 aa10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 GREB1LQ9C091 1923 aaPredicted RBP10.84□□□□□ -0.67
CACNA1A-239ENST00000637297 A0A1W2PRG0 241 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 B4E1Z4 1266 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
CACNA1A-239ENST00000637297 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms