RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 RREB1Q92766 1687 aa16.59■□□□□ 0.25
CLN6-215ENST00000636674 A0A1B0GUL6 1792 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 BMP15O95972 392 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 GNG11P61952 73 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 SEC23AQ15436 765 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 WDR24Q96S15 920 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 UBXN6Q9BZV1 441 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 CSRNP2Q9H175 543 aa16.58■□□□□ 0.25
CLN6-215ENST00000636674 CCDC66A2RUB6 948 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 PRKAB2O43741 272 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 PBX1P40424 430 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 PTPN21Q16825 1174 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 ZNF827Q17R98 1081 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 DZIP3Q86Y13 1208 aaKnown RBP16.58■□□□□ 0.24
CLN6-215ENST00000636674 TRMT44Q8IYL2 757 aaKnown RBP16.58■□□□□ 0.24
CLN6-215ENST00000636674 ST7Q9NRC1 585 aa16.58■□□□□ 0.24
CLN6-215ENST00000636674 SAMSN1Q9NSI8 373 aaKnown RBP16.58■□□□□ 0.24
CLN6-215ENST00000636674 PPP2R3AQ06190 1150 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 CUL4BQ13620 913 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 SPATA1Q5VX52 437 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 PDILTQ8N807 584 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 OXER1Q8TDS5 423 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 CICQ96RK0 1608 aaPredicted RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 AKR1B15C9JRZ8 316 aaPredicted RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 XBP1P17861 261 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 ADKP55263 362 aaKnown RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 PPARAQ07869 468 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 CDKAL1Q5VV42 579 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 BARGINQ6ZT62 677 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 GRAMD1CQ8IYS0 662 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 RABGGTAQ92696 567 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 ZKSCAN3Q9BRR0 538 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 UBAC1Q9BSL1 405 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 SEC31BQ9NQW1 1179 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 TAOK2Q9UL54 1235 aa16.57■□□□□ 0.24
CLN6-215ENST00000636674 THRAP3Q9Y2W1 955 aaKnown RBP16.57■□□□□ 0.24
CLN6-215ENST00000636674 CCDC175P0C221 793 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 FECHP22830 423 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
CLN6-215ENST00000636674 FERMT2Q96AC1 680 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 CTAGE1Q96RT6 745 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 PHF20Q9BVI0 1012 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 SYNRGQ9UMZ2 1314 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 CACNA1SQ13698 1873 aa16.56■□□□□ 0.24
CLN6-215ENST00000636674 FUT2Q10981 343 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 HSP90AA4PQ58FG1 418 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 CC2D1AQ6P1N0 951 aaPredicted RBP16.55■□□□□ 0.24
CLN6-215ENST00000636674 USP49Q70CQ1 688 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 ESR2Q92731 530 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 GSDMAQ96QA5 445 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 ADD3Q9UEY8 706 aaKnown RBP16.55■□□□□ 0.24
CLN6-215ENST00000636674 ITIH6Q6UXX5 1313 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 CYP2C19P33261 490 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 KRT2P35908 639 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 PKN1Q16512 942 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 JAKMIP3Q5VZ66 844 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 TOMM22Q9NS69 142 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 TNKSO95271 1327 aa16.55■□□□□ 0.24
CLN6-215ENST00000636674 A0A087X0B3 334 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 PRPF3O43395 683 aaKnown RBP16.54■□□□□ 0.24
CLN6-215ENST00000636674 TBC1D8O95759 1140 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 DPYDQ12882 1025 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 NUP133Q8WUM0 1156 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 GOLGA1Q92805 767 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 PAGE5Q96GU1 130 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
CLN6-215ENST00000636674 SCN7AQ01118 1682 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 MYH13Q9UKX3 1938 aa16.54■□□□□ 0.24
CLN6-215ENST00000636674 ZNF804BA4D1E1 1349 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 A0A0G2JS52 829 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 ZBTB22O15209 634 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 PCP11498 1178 aaKnown RBP16.53■□□□□ 0.24
CLN6-215ENST00000636674 TUBB2AQ13885 445 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 FAM177A1Q8N128 213 aaPredicted RBP16.53■□□□□ 0.24
CLN6-215ENST00000636674 CMTR1Q8N1G2 835 aaKnown RBP16.53■□□□□ 0.24
CLN6-215ENST00000636674 DHX58Q96C10 678 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 TUBB2BQ9BVA1 445 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 RBM28Q9NW13 759 aaKnown RBP16.53■□□□□ 0.24
CLN6-215ENST00000636674 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
CLN6-215ENST00000636674 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 KRT27Q7Z3Y8 459 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 TNFRSF25Q93038 417 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 LAMB1P07942 1786 aa16.53■□□□□ 0.24
CLN6-215ENST00000636674 TEX33O43247 280 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 MFAP3LO75121 409 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 FGRP09769 529 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 CD44P16070 742 aaKnown RBP16.52■□□□□ 0.24
CLN6-215ENST00000636674 BCAMP50895 628 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 EIF5P55010 431 aaKnown RBP16.52■□□□□ 0.24
CLN6-215ENST00000636674 CCDC152Q4G0S7 254 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.24
CLN6-215ENST00000636674 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms